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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2461 O_BomoASG12215_5prime_partial:A_BomoASG_c27459_g1_i1
423bp
 ankyrin_repeat_and_MYND_domain-containing_protein_2_[Bombyx_mori]
GO:0005929 C cilium
GO:0042995 C cell projection
GO:0046872 F metal ion binding
2462 O_BomoASG12216_5prime_partial:A_BomoASG_c27460_g1_i1
203bp
 zinc_finger_and_BTB_domain-containing_protein_11_isoform_X1_[Bombyx_mori]
2463 O_BomoASG12217_internal:A_BomoASG_c27460_g1_i2
156bp
 protein_abrupt_isoform_X2_[Bombyx_mori]
2464 O_BomoASG12218_5prime_partial:A_BomoASG_c27463_g1_i1
221bp
 Golgi-associated_PDZ_and_coiled-coil_motif-containing_protein_[Bombyx_mori]
2465 O_BomoASG12219_complete:A_BomoASG_c27463_g1_i1
125bp
2466 O_BomoASG1221_complete:A_BomoASG_c7338_g1_i1
158bp
2467 O_BomoASG12220_5prime_partial:A_BomoASG_c27463_g1_i3
174bp
 Golgi-associated_PDZ_and_coiled-coil_motif-containing_protein_[Bombyx_mori]
2468 O_BomoASG12221_complete:A_BomoASG_c27463_g1_i3
125bp
2469 O_BomoASG12222_internal:A_BomoASG_c27463_g2_i1
106bp
 Golgi-associated_PDZ_and_coiled-coil_motif-containing_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005109 F frizzled binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0007289 P spermatid nucleus differentiation
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030140 C trans-Golgi network transport vesicle
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050790 P regulation of catalytic activity
GO:0051260 P protein homooligomerization
2470 O_BomoASG12223_5prime_partial:A_BomoASG_c27463_g2_i1
106bp
2471 O_BomoASG12224_internal:A_BomoASG_c27463_g2_i1
105bp
2472 O_BomoASG12225_internal:A_BomoASG_c27464_g1_i1
199bp
 ankyrin_repeat_domain-containing_protein_17_[Bombyx_mori]
2473 O_BomoASG12226_internal:A_BomoASG_c27464_g1_i1
198bp
2474 O_BomoASG12227_complete:A_BomoASG_c27466_g1_i1
516bp
 integral_membrane_protein_GPR180_[Bombyx_mori]
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019236 P response to pheromone
2475 O_BomoASG12228_complete:A_BomoASG_c27466_g1_i1
140bp
2476 O_BomoASG12229_internal:A_BomoASG_c27468_g1_i1
261bp
 uncharacterized_protein_LOC105841502_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
2477 O_BomoASG1222_complete:A_BomoASG_c7338_g1_i1
123bp
2478 O_BomoASG12230_complete:A_BomoASG_c27469_g1_i1
153bp
 plasminogen_receptor_(KT)_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006935 P chemotaxis
GO:0006954 P inflammatory response
GO:0010756 P positive regulation of plasminogen activation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2479 O_BomoASG12231_5prime_partial:A_BomoASG_c27471_g1_i1
243bp
 transformer_2_isoform_A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
2480 O_BomoASG12232_complete:A_BomoASG_c27471_g1_i1
207bp
2481 O_BomoASG12233_complete:A_BomoASG_c27471_g1_i3
274bp
 transformer_2_isoform_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
2482 O_BomoASG12234_complete:A_BomoASG_c27471_g1_i3
207bp
2483 O_BomoASG12235_internal:A_BomoASG_c27474_g1_i1
259bp
 uncharacterized_protein_LOC101743708_[Bombyx_mori]
2484 O_BomoASG12236_complete:A_BomoASG_c27474_g1_i1
156bp
2485 O_BomoASG12237_3prime_partial:A_BomoASG_c27475_g1_i1
314bp
 uncharacterized_protein_LOC105841590_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008150 P biological_process
2486 O_BomoASG12238_complete:A_BomoASG_c27475_g1_i1
203bp
2487 O_BomoASG12239_complete:A_BomoASG_c27476_g1_i1
625bp
 transmembrane_9_superfamily_member_4_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2488 O_BomoASG1223_internal:A_BomoASG_c7345_g1_i1
247bp
 dnaJ_homolog_subfamily_C_member_16_precursor_[Bombyx_mori]
GO:0005623 C obsolete cell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
2489 O_BomoASG12240_5prime_partial:A_BomoASG_c27476_g1_i2
387bp
 transmembrane_9_superfamily_member_4_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2490 O_BomoASG12241_complete:A_BomoASG_c27478_g1_i2
112bp
 protein_aveugle_[Bombyx_mori]
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0050896 P response to stimulus
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
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