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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1801 O_BomoASG11621_complete:A_BomoASG_c27106_g1_i1
100bp
1802 O_BomoASG11622_internal:A_BomoASG_c27106_g1_i2
244bp
 cleavage_and_polyadenylation_specific_factor_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1803 O_BomoASG11623_5prime_partial:A_BomoASG_c27107_g1_i1
142bp
 polypeptide_N-acetylgalactosaminyltransferase_10_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
1804 O_BomoASG11624_complete:A_BomoASG_c27108_g2_i1
155bp
1805 O_BomoASG11625_5prime_partial:A_BomoASG_c27108_g2_i1
114bp
 reverse_transcriptase,_partial_[Bombyx_mori]
1806 O_BomoASG11626_complete:A_BomoASG_c27109_g2_i1
1335bp
 Niemann-Pick_C1_protein_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
1807 O_BomoASG11627_complete:A_BomoASG_c27109_g2_i1
369bp
1808 O_BomoASG11628_complete:A_BomoASG_c27109_g2_i1
124bp
 hypothetical_protein_ALC53_04645_[Atta_colombica]
1809 O_BomoASG11629_complete:A_BomoASG_c27109_g2_i1
122bp
1810 O_BomoASG1162_complete:A_BomoASG_c6797_g1_i1
284bp
 proteasome_subunit_beta_7_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0051603 P proteolysis involved in cellular protein catabolic process
1811 O_BomoASG11630_complete:A_BomoASG_c27109_g2_i4
1295bp
 Niemann-Pick_C1_protein_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
1812 O_BomoASG11631_complete:A_BomoASG_c27109_g2_i4
369bp
1813 O_BomoASG11632_complete:A_BomoASG_c27109_g2_i4
337bp
1814 O_BomoASG11633_complete:A_BomoASG_c27109_g2_i4
124bp
 hypothetical_protein_ALC53_04645_[Atta_colombica]
1815 O_BomoASG11634_complete:A_BomoASG_c27109_g2_i4
122bp
1816 O_BomoASG11635_complete:A_BomoASG_c27109_g2_i5
1311bp
 Niemann-Pick_C1_protein_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
1817 O_BomoASG11636_complete:A_BomoASG_c27109_g2_i5
369bp
1818 O_BomoASG11637_complete:A_BomoASG_c27109_g2_i5
124bp
 hypothetical_protein_ALC53_04645_[Atta_colombica]
1819 O_BomoASG11638_complete:A_BomoASG_c27109_g2_i5
122bp
1820 O_BomoASG11639_complete:A_BomoASG_c27111_g1_i1
126bp
1821 O_BomoASG1163_complete:A_BomoASG_c6797_g1_i1
112bp
1822 O_BomoASG11640_5prime_partial:A_BomoASG_c27112_g1_i2
234bp
 zinc_transporter_1_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006882 P cellular zinc ion homeostasis
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019855 F calcium channel inhibitor activity
GO:0030315 C T-tubule
GO:0031965 C nuclear membrane
GO:0046929 P negative regulation of neurotransmitter secretion
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0070509 P calcium ion import
GO:0070574 P cadmium ion transmembrane transport
GO:0071577 P zinc ion transmembrane transport
GO:0071584 P negative regulation of zinc ion transmembrane import
GO:0071585 P detoxification of cadmium ion
GO:0090281 P negative regulation of calcium ion import
1823 O_BomoASG11641_complete:A_BomoASG_c27113_g1_i1
137bp
 hypothetical_protein_FF38_07250_[Lucilia_cuprina]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0042802 F identical protein binding
1824 O_BomoASG11642_5prime_partial:A_BomoASG_c27114_g1_i1
209bp
 integral_membrane_protein_GPR155_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035556 P intracellular signal transduction
GO:0050890 P cognition
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
1825 O_BomoASG11643_3prime_partial:A_BomoASG_c27117_g1_i1
202bp
 cuticular_protein_glycine-rich_9_precursor_[Bombyx_mori]
1826 O_BomoASG11644_complete:A_BomoASG_c27118_g1_i1
546bp
 fatty-acid_amide_hydrolase_2_isoform_X1_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
1827 O_BomoASG11645_complete:A_BomoASG_c27118_g1_i2
516bp
 fatty-acid_amide_hydrolase_2_isoform_X3_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
1828 O_BomoASG11646_complete:A_BomoASG_c27119_g1_i1
266bp
 unc-50-like_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
1829 O_BomoASG11647_internal:A_BomoASG_c27121_g1_i1
212bp
 eIF-2-alpha_kinase_GCN2_isoform_X2_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0002250 P adaptive immune response
GO:0002286 P T cell activation involved in immune response
GO:0002376 P immune system process
GO:0002821 P positive regulation of adaptive immune response
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007399 P nervous system development
GO:0007612 P learning
GO:0007616 P long-term memory
GO:0009267 P cellular response to starvation
GO:0010628 P positive regulation of gene expression
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
GO:0019081 P viral translation
GO:0022626 C cytosolic ribosome
GO:0030154 P cell differentiation
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032057 P negative regulation of translational initiation in response to stress
GO:0032792 P negative regulation of CREB transcription factor activity
GO:0034198 P cellular response to amino acid starvation
GO:0034644 P cellular response to UV
GO:0034976 P response to endoplasmic reticulum stress
GO:0036492 P eiF2alpha phosphorylation in response to endoplasmic reticulum stress
GO:0039520 P induction by virus of host autophagy
GO:0043558 P regulation of translational initiation in response to stress
GO:0044828 P negative regulation by host of viral genome replication
GO:0045665 P negative regulation of neuron differentiation
GO:0045947 P negative regulation of translational initiation
GO:0046777 P protein autophosphorylation
GO:0051607 P defense response to virus
GO:0060259 P regulation of feeding behavior
GO:0060733 P GCN2-mediated signaling
GO:0070417 P cellular response to cold
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:1900273 P positive regulation of long-term synaptic potentiation
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
1830 O_BomoASG11648_complete:A_BomoASG_c27123_g1_i1
587bp
 kelch-like_protein_diablo_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005575 C cellular_component
GO:0016049 P cell growth
GO:0016567 P protein ubiquitination
GO:0050807 P regulation of synapse organization
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