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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1471 O_BomoASG11324_complete:A_BomoASG_c26948_g1_i1
290bp
 ubiquitin_domain-containing_protein_UBFD1_[Bombyx_mori]
GO:0044822 F RNA binding
1472 O_BomoASG11325_internal:A_BomoASG_c26949_g1_i2
256bp
 RNA-binding_protein_25_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
1473 O_BomoASG11326_internal:A_BomoASG_c26949_g1_i2
256bp
 PREDICTED:_flocculation_protein_FLO11-like,_partial_[Saccoglossus_kowalevskii]
1474 O_BomoASG11327_5prime_partial:A_BomoASG_c26949_g1_i2
220bp
1475 O_BomoASG11328_5prime_partial:A_BomoASG_c26949_g1_i2
191bp
1476 O_BomoASG11329_5prime_partial:A_BomoASG_c26949_g1_i3
236bp
1477 O_BomoASG1132_complete:A_BomoASG_c6688_g1_i1
533bp
 EH_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0010008 C endosome membrane
GO:0010886 P positive regulation of cholesterol storage
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0020018 C ciliary pocket membrane
GO:0030030 P cell projection organization
GO:0030139 C endocytic vesicle
GO:0031095 C platelet dense tubular network membrane
GO:0031175 P neuron projection development
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0034383 P low-density lipoprotein particle clearance
GO:0042384 P cilium assembly
GO:0042632 P cholesterol homeostasis
GO:0042995 C cell projection
GO:0043209 C myelin sheath
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055038 C recycling endosome membrane
GO:0060170 C ciliary membrane
GO:0061512 P protein localization to cilium
GO:1901741 P positive regulation of myoblast fusion
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2001137 P positive regulation of endocytic recycling
1478 O_BomoASG11330_5prime_partial:A_BomoASG_c26949_g1_i3
214bp
 PREDICTED:_flocculation_protein_FLO11-like,_partial_[Saccoglossus_kowalevskii]
1479 O_BomoASG11331_3prime_partial:A_BomoASG_c26949_g1_i3
206bp
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
1480 O_BomoASG11332_5prime_partial:A_BomoASG_c26949_g1_i3
196bp
1481 O_BomoASG11333_complete:A_BomoASG_c26951_g1_i1
139bp
 uncharacterized_protein_LOC101745236_[Bombyx_mori]
1482 O_BomoASG11334_complete:A_BomoASG_c26951_g1_i1
122bp
1483 O_BomoASG11335_complete:A_BomoASG_c26951_g1_i2
686bp
 rho_guanine_nucleotide_exchange_factor_7_isoform_X2_[Helicoverpa_armigera]
GO:0000322 C storage vacuole
GO:0001726 C ruffle
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0010763 P positive regulation of fibroblast migration
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030054 C cell junction
GO:0032092 P positive regulation of protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0048041 P focal adhesion assembly
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0060124 P positive regulation of growth hormone secretion
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1904424 P regulation of GTP binding
GO:2000394 P positive regulation of lamellipodium morphogenesis
1484 O_BomoASG11336_complete:A_BomoASG_c26951_g1_i2
122bp
1485 O_BomoASG11337_3prime_partial:A_BomoASG_c26951_g1_i3
621bp
 rho_guanine_nucleotide_exchange_factor_7_isoform_X3_[Helicoverpa_armigera]
GO:0000322 C storage vacuole
GO:0001726 C ruffle
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0010763 P positive regulation of fibroblast migration
GO:0019901 F protein kinase binding
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030054 C cell junction
GO:0032092 P positive regulation of protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0048041 P focal adhesion assembly
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0060124 P positive regulation of growth hormone secretion
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1904424 P regulation of GTP binding
GO:2000394 P positive regulation of lamellipodium morphogenesis
1486 O_BomoASG11338_3prime_partial:A_BomoASG_c26953_g1_i1
178bp
 uncharacterized_protein_LOC101746598_[Bombyx_mori]
1487 O_BomoASG11339_5prime_partial:A_BomoASG_c26953_g1_i1
157bp
1488 O_BomoASG1133_complete:A_BomoASG_c6688_g1_i1
147bp
1489 O_BomoASG11340_5prime_partial:A_BomoASG_c26958_g1_i1
109bp
 dual_serine/threonine_and_tyrosine_protein_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030054 C cell junction
GO:0035556 P intracellular signal transduction
GO:0048568 P embryonic organ development
1490 O_BomoASG11341_complete:A_BomoASG_c26960_g1_i1
225bp
 polycomb_group_RING_finger_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0031519 C PcG protein complex
GO:0046872 F metal ion binding
1491 O_BomoASG11342_5prime_partial:A_BomoASG_c26961_g1_i1
143bp
 LOW_QUALITY_PROTEIN:_sugar_transporter_SWEET1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007431 P salivary gland development
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034219 P carbohydrate transmembrane transport
GO:0051119 F sugar transmembrane transporter activity
1492 O_BomoASG11343_5prime_partial:A_BomoASG_c26962_g1_i1
103bp
1493 O_BomoASG11344_3prime_partial:A_BomoASG_c26964_g1_i1
336bp
 uncharacterized_protein_LOC101736680_[Bombyx_mori]
GO:0005634 C nucleus
GO:0030261 P chromosome condensation
GO:0051276 P chromosome organization
1494 O_BomoASG11345_complete:A_BomoASG_c26964_g1_i1
153bp
1495 O_BomoASG11346_5prime_partial:A_BomoASG_c26964_g1_i1
150bp
1496 O_BomoASG11347_complete:A_BomoASG_c26964_g1_i1
147bp
1497 O_BomoASG11348_3prime_partial:A_BomoASG_c26964_g1_i2
375bp
 uncharacterized_protein_LOC101736680_[Bombyx_mori]
GO:0005634 C nucleus
GO:0030261 P chromosome condensation
GO:0051276 P chromosome organization
1498 O_BomoASG11349_complete:A_BomoASG_c26964_g1_i2
159bp
1499 O_BomoASG1134_complete:A_BomoASG_c6688_g1_i1
112bp
1500 O_BomoASG11350_5prime_partial:A_BomoASG_c26964_g1_i2
150bp
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