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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1141 O_BomoASG11027_complete:A_BomoASG_c26736_g1_i2
114bp
1142 O_BomoASG11028_complete:A_BomoASG_c26736_g1_i2
113bp
1143 O_BomoASG11029_complete:A_BomoASG_c26736_g1_i2
105bp
1144 O_BomoASG1102_complete:A_BomoASG_c6563_g1_i2
388bp
 heterogeneous_nuclear_ribonucleoprotein_K_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
1145 O_BomoASG11030_complete:A_BomoASG_c26736_g1_i3
1365bp
 uncharacterized_protein_LOC101741222_isoform_X2_[Bombyx_mori]
1146 O_BomoASG11031_complete:A_BomoASG_c26736_g1_i3
138bp
1147 O_BomoASG11032_complete:A_BomoASG_c26736_g1_i3
114bp
1148 O_BomoASG11033_complete:A_BomoASG_c26736_g1_i3
113bp
1149 O_BomoASG11034_complete:A_BomoASG_c26736_g1_i3
105bp
1150 O_BomoASG11035_internal:A_BomoASG_c26738_g1_i1
128bp
 ribosomal_protein_S6_kinase,_90_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001501 P skeletal system development
GO:0002224 P toll-like receptor signaling pathway
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007417 P central nervous system development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030307 P positive regulation of cell growth
GO:0032496 P response to lipopolysaccharide
GO:0035556 P intracellular signal transduction
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043555 P regulation of translation in response to stress
GO:0043620 P regulation of DNA-templated transcription in response to stress
GO:0045597 P positive regulation of cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
1151 O_BomoASG11036_internal:A_BomoASG_c26738_g1_i2
341bp
 ribosomal_protein_S6_kinase,_90_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001501 P skeletal system development
GO:0002224 P toll-like receptor signaling pathway
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007417 P central nervous system development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030307 P positive regulation of cell growth
GO:0032496 P response to lipopolysaccharide
GO:0035556 P intracellular signal transduction
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043555 P regulation of translation in response to stress
GO:0043620 P regulation of DNA-templated transcription in response to stress
GO:0045597 P positive regulation of cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
1152 O_BomoASG11037_complete:A_BomoASG_c26738_g1_i2
104bp
1153 O_BomoASG11038_internal:A_BomoASG_c26738_g1_i3
429bp
 ribosomal_protein_S6_kinase,_90_kDa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001501 P skeletal system development
GO:0002224 P toll-like receptor signaling pathway
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007417 P central nervous system development
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030307 P positive regulation of cell growth
GO:0032496 P response to lipopolysaccharide
GO:0035556 P intracellular signal transduction
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043555 P regulation of translation in response to stress
GO:0043620 P regulation of DNA-templated transcription in response to stress
GO:0045597 P positive regulation of cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
1154 O_BomoASG11039_complete:A_BomoASG_c26738_g1_i3
104bp
1155 O_BomoASG1103_complete:A_BomoASG_c6563_g1_i2
162bp
1156 O_BomoASG11040_internal:A_BomoASG_c26739_g1_i1
116bp
 clathrin_coat_assembly_protein_AP180_[Bombyx_mori]
1157 O_BomoASG11041_internal:A_BomoASG_c26739_g1_i2
162bp
 clathrin_coat_assembly_protein_AP180_[Bombyx_mori]
1158 O_BomoASG11042_internal:A_BomoASG_c26740_g1_i1
115bp
 beta-secretase_1_[Bombyx_mori]
1159 O_BomoASG11043_internal:A_BomoASG_c26740_g1_i2
299bp
 beta-secretase_1_[Bombyx_mori]
GO:0001540 F amyloid-beta binding
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0008233 F peptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030163 P protein catabolic process
GO:0030424 C axon
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0050435 P amyloid-beta metabolic process
1160 O_BomoASG11044_internal:A_BomoASG_c26743_g1_i1
112bp
 coronin-7_[Bombyx_mori]
1161 O_BomoASG11045_internal:A_BomoASG_c26743_g1_i2
404bp
 PREDICTED:_coronin-7_isoform_X2_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030041 P actin filament polymerization
GO:0031410 C cytoplasmic vesicle
1162 O_BomoASG11046_internal:A_BomoASG_c26744_g1_i1
240bp
 uncharacterized_protein_LOC101744402_[Bombyx_mori]
1163 O_BomoASG11047_internal:A_BomoASG_c26746_g1_i1
359bp
 uncharacterized_protein_LOC110386273_[Bombyx_mori]
1164 O_BomoASG11048_complete:A_BomoASG_c26747_g1_i1
724bp
 long-chain-fatty-acid--CoA_ligase_4_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0030182 P neuron differentiation
GO:0030307 P positive regulation of cell growth
GO:0031090 C organelle membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0031966 C mitochondrial membrane
GO:0032307 P negative regulation of prostaglandin secretion
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0047676 F arachidonate-CoA ligase activity
GO:0060136 P embryonic process involved in female pregnancy
GO:0060996 P dendritic spine development
GO:0070062 C extracellular exosome
GO:0070672 P response to interleukin-15
1165 O_BomoASG11049_complete:A_BomoASG_c26747_g1_i1
209bp
1166 O_BomoASG1104_complete:A_BomoASG_c6563_g1_i2
135bp
1167 O_BomoASG11050_complete:A_BomoASG_c26747_g1_i1
198bp
1168 O_BomoASG11051_complete:A_BomoASG_c26747_g1_i1
108bp
1169 O_BomoASG11052_5prime_partial:A_BomoASG_c26747_g1_i1
102bp
1170 O_BomoASG11053_complete:A_BomoASG_c26747_g1_i2
717bp
 long-chain-fatty-acid--CoA_ligase_4_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0030182 P neuron differentiation
GO:0030307 P positive regulation of cell growth
GO:0031090 C organelle membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0031966 C mitochondrial membrane
GO:0032307 P negative regulation of prostaglandin secretion
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0047676 F arachidonate-CoA ligase activity
GO:0060136 P embryonic process involved in female pregnancy
GO:0060996 P dendritic spine development
GO:0070062 C extracellular exosome
GO:0070672 P response to interleukin-15
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