Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
10081	O_BomoASG19074_complete:A_BomoASG_c30435_g4_i1 104bp		hypothetical_protein_[uncultured_delta_proteobacterium_HF0200_14D13]
10082	O_BomoASG19075_complete:A_BomoASG_c30436_g1_i1 164bp	Bomo_Chr20	SCF_apoptosis_response_protein_[Bombyx_mori]	GO:0000042 P protein localization to Golgi apparatus GO:0000139 C Golgi membrane GO:0005794 C Golgi apparatus GO:0005802 C trans-Golgi network GO:0005829 C cytosol GO:0006810 P transport GO:0006895 P Golgi to endosome transport GO:0015031 P protein transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030173 C integral component of Golgi membrane GO:0043001 P Golgi to plasma membrane protein transport
10083	O_BomoASG19076_5prime_partial:A_BomoASG_c30437_g1_i1 213bp	Bomo_Chr12	mediator_of_RNA_polymerase_II_transcription_subunit_8_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0016592 C mediator complex GO:0051726 P regulation of cell cycle
10084	O_BomoASG19077_5prime_partial:A_BomoASG_c30437_g1_i2 116bp	Bomo_Chr12	mediator_of_RNA_polymerase_II_transcription_subunit_8_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0016592 C mediator complex GO:0051726 P regulation of cell cycle
10085	O_BomoASG19078_3prime_partial:A_BomoASG_c30438_g1_i1 966bp	Bomo_Chr22	uncharacterized_protein_LOC101738570_isoform_X1_[Bombyx_mori]
10086	O_BomoASG19079_3prime_partial:A_BomoASG_c30438_g1_i2 962bp	Bomo_Chr22	sporulation-specific_protein_15_isoform_X2_[Bombyx_mori]
10087	O_BomoASG1907_5prime_partial:A_BomoASG_c12226_g1_i1 146bp	Bomo_Chr17
10088	O_BomoASG19080_internal:A_BomoASG_c30439_g1_i2 373bp	Bomo_Chr6	uncharacterized_protein_LOC101738662_isoform_X1_[Bombyx_mori]	GO:0001669 C acrosomal vesicle GO:0005215 F transporter activity GO:0006810 P transport GO:0006836 P neurotransmitter transport GO:0007268 P chemical synaptic transmission GO:0008021 C synaptic vesicle GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0030054 C cell junction GO:0030672 C synaptic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0045202 C synapse GO:0055085 P transmembrane transport
10089	O_BomoASG19081_5prime_partial:A_BomoASG_c30439_g1_i2 108bp	Bomo_Chr6
10090	O_BomoASG19082_complete:A_BomoASG_c30439_g1_i2 106bp	Bomo_Chr6
10091	O_BomoASG19083_internal:A_BomoASG_c30439_g1_i3 380bp	Bomo_Chr6	synaptic_vesicle_2-related_protein_isoform_X2_[Bombyx_mori]	GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0030054 C cell junction GO:0030672 C synaptic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0045202 C synapse GO:0055085 P transmembrane transport
10092	O_BomoASG19084_internal:A_BomoASG_c30439_g1_i5 568bp	Bomo_Chr6	putative_transporter_SVOPL_[Helicoverpa_armigera]	GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0030054 C cell junction GO:0030672 C synaptic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0045202 C synapse GO:0055085 P transmembrane transport
10093	O_BomoASG19085_complete:A_BomoASG_c30439_g1_i5 106bp	Bomo_Chr6
10094	O_BomoASG19086_internal:A_BomoASG_c30439_g1_i6 473bp	Bomo_Chr6	uncharacterized_protein_LOC101738662_isoform_X1_[Bombyx_mori]	GO:0005215 F transporter activity GO:0005351 F carbohydrate:proton symporter activity GO:0005355 F glucose transmembrane transporter activity GO:0005783 C endoplasmic reticulum GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0009414 P response to water deprivation GO:0009651 P response to salt stress GO:0009737 P response to abscisic acid GO:0010200 P response to chitin GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0035428 P hexose transmembrane transport GO:0046323 P glucose import GO:0051119 F sugar transmembrane transporter activity GO:0055085 P transmembrane transport GO:1904659 P glucose transmembrane transport
10095	O_BomoASG19087_complete:A_BomoASG_c30439_g1_i6 106bp	Bomo_Chr6
10096	O_BomoASG19088_internal:A_BomoASG_c30442_g1_i1 163bp	Bomo_Chr11	sericin_1A'_[Bombyx_mori]	GO:0005576 C extracellular region
10097	O_BomoASG19089_internal:A_BomoASG_c30442_g1_i2 198bp	Bomo_Chr11	sericin_1A'_[Bombyx_mori]	GO:0005576 C extracellular region
10098	O_BomoASG1908_complete:A_BomoASG_c12226_g1_i1 101bp	Bomo_Chr17
10099	O_BomoASG19090_internal:A_BomoASG_c30442_g1_i3 133bp	Bomo_Chr11	sericin_1_precursor_[Bombyx_mori]	GO:0005576 C extracellular region
10100	O_BomoASG19091_5prime_partial:A_BomoASG_c30443_g1_i1 312bp	Bomo_Chr12	U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0000398 P mRNA splicing, via spliceosome GO:0000481 P maturation of 5S rRNA GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005794 C Golgi apparatus GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0015030 C Cajal body GO:0044822 F RNA binding GO:0045292 P mRNA cis splicing, via spliceosome GO:0045585 P positive regulation of cytotoxic T cell differentiation GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071013 C catalytic step 2 spliceosome
10101	O_BomoASG19092_complete:A_BomoASG_c30443_g1_i1 265bp	Bomo_Chr12
10102	O_BomoASG19093_5prime_partial:A_BomoASG_c30443_g1_i1 140bp	Bomo_Chr12
10103	O_BomoASG19094_internal:A_BomoASG_c30443_g1_i2 340bp	Bomo_Chr12	U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0000398 P mRNA splicing, via spliceosome GO:0000481 P maturation of 5S rRNA GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005794 C Golgi apparatus GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0015030 C Cajal body GO:0044822 F RNA binding GO:0045292 P mRNA cis splicing, via spliceosome GO:0045585 P positive regulation of cytotoxic T cell differentiation GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071013 C catalytic step 2 spliceosome
10104	O_BomoASG19095_5prime_partial:A_BomoASG_c30443_g1_i2 298bp	Bomo_Chr12
10105	O_BomoASG19096_5prime_partial:A_BomoASG_c30443_g1_i2 153bp	Bomo_Chr12
10106	O_BomoASG19097_5prime_partial:A_BomoASG_c30443_g1_i3 333bp	Bomo_Chr12	U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0000398 P mRNA splicing, via spliceosome GO:0000481 P maturation of 5S rRNA GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005794 C Golgi apparatus GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0015030 C Cajal body GO:0044822 F RNA binding GO:0045292 P mRNA cis splicing, via spliceosome GO:0045585 P positive regulation of cytotoxic T cell differentiation GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071013 C catalytic step 2 spliceosome
10107	O_BomoASG19098_complete:A_BomoASG_c30443_g1_i3 110bp	Bomo_Chr12
10108	O_BomoASG19099_internal:A_BomoASG_c30444_g1_i1 901bp	Bomo_Chr25	ubiquitin_carboxyl-terminal_hydrolase_34_[Bombyx_mori]	GO:0000124 C SAGA complex GO:0004197 F cysteine-type endopeptidase activity GO:0004843 F thiol-dependent deubiquitinase GO:0005515 F protein binding GO:0005829 C cytosol GO:0006355 P regulation of transcription, DNA-templated GO:0006508 P proteolysis GO:0006511 P ubiquitin-dependent protein catabolic process GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016055 P Wnt signaling pathway GO:0016578 P histone deubiquitination GO:0016579 P protein deubiquitination GO:0016787 F hydrolase activity GO:0036459 F thiol-dependent deubiquitinase GO:0071108 P protein K48-linked deubiquitination GO:0090263 P positive regulation of canonical Wnt signaling pathway
10109	O_BomoASG1909_complete:A_BomoASG_c12226_g1_i2 549bp	Bomo_Chr17	poly(A)-specific_ribonuclease_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0004535 F poly(A)-specific ribonuclease activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006402 P mRNA catabolic process GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0051321 P meiotic cell cycle GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
10110	O_BomoASG190_internal:A_BomoASG_c1541_g1_i1 130bp	Bomo_Chr5	reverse_ribonuclease_integrase,_partial_[Lasius_niger]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0005634 C nucleus GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006313 P transposition, DNA-mediated GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis