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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1321 O_SariMG12156_complete:A_SariMG_comp29622_c0_seq1
225bp
GO:0000139 C Golgi membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0032527 P protein exit from endoplasmic reticulum
GO:0048208 P COPII vesicle coating
GO:0070971 C endoplasmic reticulum exit site
GO:0070973 P protein localization to endoplasmic reticulum exit site
1322 O_SariMG12158_complete:A_SariMG_comp29622_c0_seq2
2094bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007029 P endoplasmic reticulum organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0021762 P substantia nigra development
GO:0048208 P COPII vesicle coating
1323 O_SariMG1215_complete:A_SariMG_comp15348_c0_seq1
211bp
PREDICTED:_DNA-directed_RNA_polymerases_I,_II,_and_III_subunit_RPABC1_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
1324 O_SariMG12167_complete:A_SariMG_comp29622_c0_seq3
2119bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007029 P endoplasmic reticulum organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0021762 P substantia nigra development
GO:0048208 P COPII vesicle coating
1325 O_SariMG12177_5prime_partial:A_SariMG_comp29622_c1_seq2
127bp
1326 O_SariMG12179_5prime_partial:A_SariMG_comp29623_c0_seq1
1016bp
GO:0004197 F cysteine-type endopeptidase activity
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0022416 P chaeta development
GO:0035071 P salivary gland cell autophagic cell death
GO:0035220 P wing disc development
GO:0045169 C fusome
GO:0048102 P autophagic cell death
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0098595 C perivitelline space
1327 O_SariMG12182_internal:A_SariMG_comp29623_c0_seq2
103bp
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
1328 O_SariMG12183_5prime_partial:A_SariMG_comp29624_c0_seq1
252bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
1329 O_SariMG12185_internal:A_SariMG_comp29624_c0_seq2
437bp
1330 O_SariMG1218_3prime_partial:A_SariMG_comp15355_c0_seq1
197bp
Ras_GTPase-activating_protein-binding_protein_2_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
1331 O_SariMG12190_internal:A_SariMG_comp29624_c0_seq3
415bp
1332 O_SariMG12194_5prime_partial:A_SariMG_comp29624_c0_seq4
274bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
1333 O_SariMG12197_3prime_partial:A_SariMG_comp29624_c0_seq5
172bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005087 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005881 C cytoplasmic microtubule
GO:0008536 F small GTPase binding
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
1334 O_SariMG1219_complete:A_SariMG_comp15360_c0_seq1
519bp
PREDICTED:_putative_inorganic_phosphate_cotransporter_isoform_X2_[Papilio_polytes]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
1335 O_SariMG121_5prime_partial:A_SariMG_comp13139_c0_seq1
266bp
PREDICTED:_protein_toll-like_isoform_X1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
1336 O_SariMG12200_5prime_partial:A_SariMG_comp29625_c0_seq1
211bp
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
1337 O_SariMG12202_complete:A_SariMG_comp29626_c0_seq1
618bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016787 F hydrolase activity
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0033178 C proton-transporting two-sector ATPase complex, catalytic domain
GO:0033180 C proton-transporting V-type ATPase, V1 domain
GO:0046034 P ATP metabolic process
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
1338 O_SariMG12203_complete:A_SariMG_comp29627_c0_seq1
402bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008047 F enzyme activator activity
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0043085 P positive regulation of catalytic activity
1339 O_SariMG12204_complete:A_SariMG_comp29627_c0_seq2
402bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008047 F enzyme activator activity
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0043085 P positive regulation of catalytic activity
1340 O_SariMG12205_complete:A_SariMG_comp29627_c0_seq3
427bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008047 F enzyme activator activity
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0043085 P positive regulation of catalytic activity
1341 O_SariMG12206_complete:A_SariMG_comp29627_c0_seq4
427bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008047 F enzyme activator activity
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0043085 P positive regulation of catalytic activity
1342 O_SariMG12207_complete:A_SariMG_comp29628_c1_seq1
562bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1343 O_SariMG12209_complete:A_SariMG_comp29628_c1_seq2
293bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042733 P embryonic digit morphogenesis
1344 O_SariMG1220_complete:A_SariMG_comp15360_c0_seq2
521bp
PREDICTED:_putative_inorganic_phosphate_cotransporter_isoform_X1_[Papilio_polytes]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
1345 O_SariMG12211_5prime_partial:A_SariMG_comp29629_c0_seq1
913bp
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016604 C nuclear body
GO:0017069 F snRNA binding
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
1346 O_SariMG12213_5prime_partial:A_SariMG_comp29629_c0_seq2
913bp
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016604 C nuclear body
GO:0017069 F snRNA binding
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
1347 O_SariMG1221_complete:A_SariMG_comp15366_c0_seq1
160bp
PREDICTED:_lysozyme-like_[Amyelois_transitella]
GO:0003796 F lysozyme activity
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019835 P cytolysis
GO:0042742 P defense response to bacterium
1348 O_SariMG12220_complete:A_SariMG_comp29631_c0_seq1
323bp
GO:0000502 C proteasome complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000717 P nucleotide-excision repair, DNA duplex unwinding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0032434 P regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048568 P embryonic organ development
GO:0070911 P global genome nucleotide-excision repair
GO:0071942 C XPC complex
1349 O_SariMG12221_complete:A_SariMG_comp29631_c0_seq1
290bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007623 P circadian rhythm
GO:0030154 P cell differentiation
GO:0033762 P response to glucagon
GO:0043565 F sequence-specific DNA binding
GO:0045600 P positive regulation of fat cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0048511 P rhythmic process
GO:0050821 P protein stabilization
1350 O_SariMG12222_complete:A_SariMG_comp29631_c0_seq2
323bp
GO:0000502 C proteasome complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000717 P nucleotide-excision repair, DNA duplex unwinding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0032434 P regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048568 P embryonic organ development
GO:0070911 P global genome nucleotide-excision repair
GO:0071942 C XPC complex
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