SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/15605
No. Name
Length
Chromosome No./Scaffold Id
Scaffold Length
BLAST (vs nr) Gene ontology
961 O_TrvaMG11694_complete:A_TrvaMG_comp26167_c0_seq1
896bp
GO:0000166 F nucleotide binding
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000902 P cell morphogenesis
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005691 C U6atac snRNP
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0017070 F U6 snRNA binding
GO:0030621 F U4 snRNA binding
GO:0030624 F U6atac snRNA binding
GO:0042393 F histone binding
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0048872 P homeostasis of number of cells
GO:0071001 C U4/U6 snRNP
GO:0071002 C U4atac/U6atac snRNP
GO:0071425 P hematopoietic stem cell proliferation
GO:1903586 P positive regulation of histone deubiquitination
GO:1990381 F ubiquitin-specific protease binding
962 O_TrvaMG11695_complete:A_TrvaMG_comp26167_c0_seq2
779bp
GO:0000166 F nucleotide binding
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000902 P cell morphogenesis
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005691 C U6atac snRNP
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0017070 F U6 snRNA binding
GO:0030621 F U4 snRNA binding
GO:0030624 F U6atac snRNA binding
GO:0042393 F histone binding
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0048872 P homeostasis of number of cells
GO:0071001 C U4/U6 snRNP
GO:0071002 C U4atac/U6atac snRNP
GO:0071425 P hematopoietic stem cell proliferation
GO:1903586 P positive regulation of histone deubiquitination
GO:1990381 F ubiquitin-specific protease binding
963 O_TrvaMG11696_3prime_partial:A_TrvaMG_comp26168_c0_seq1
475bp
964 O_TrvaMG11698_internal:A_TrvaMG_comp26168_c0_seq2
1158bp
GO:0004871 F obsolete signal transducer activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0035023 P regulation of Rho protein signal transduction
GO:0035767 P endothelial cell chemotaxis
GO:0042995 C cell projection
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043542 P endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
965 O_TrvaMG116_5prime_partial:A_TrvaMG_comp11281_c0_seq1
272bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_nonstop_[Papilio_machaon]
GO:0000124 C SAGA complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008347 P glial cell migration
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021782 P glial cell development
GO:0036459 F thiol-dependent deubiquitinase
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071819 C DUBm complex
966 O_TrvaMG11700_complete:A_TrvaMG_comp26169_c0_seq1
232bp
967 O_TrvaMG11701_complete:A_TrvaMG_comp26169_c0_seq2
151bp
968 O_TrvaMG11702_complete:A_TrvaMG_comp26169_c0_seq3
234bp
969 O_TrvaMG11703_complete:A_TrvaMG_comp26169_c0_seq4
199bp
970 O_TrvaMG11704_complete:A_TrvaMG_comp26171_c0_seq1
402bp
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0017070 F U6 snRNA binding
GO:0033120 P positive regulation of RNA splicing
GO:0035690 P cellular response to xenobiotic stimulus
GO:0036002 F pre-mRNA binding
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046872 F metal ion binding
GO:0048306 F calcium-dependent protein binding
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071007 C U2-type catalytic step 2 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0090316 P positive regulation of intracellular protein transport
971 O_TrvaMG11706_5prime_partial:A_TrvaMG_comp26172_c0_seq1
817bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
972 O_TrvaMG11707_3prime_partial:A_TrvaMG_comp26172_c0_seq1
466bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
973 O_TrvaMG11708_complete:A_TrvaMG_comp26173_c0_seq1
1604bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
974 O_TrvaMG11711_complete:A_TrvaMG_comp26173_c0_seq2
1618bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
975 O_TrvaMG11714_internal:A_TrvaMG_comp26174_c0_seq1
149bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
976 O_TrvaMG11715_internal:A_TrvaMG_comp26174_c0_seq2
499bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
977 O_TrvaMG11716_3prime_partial:A_TrvaMG_comp26174_c1_seq1
154bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005903 C brush border
GO:0005975 P carbohydrate metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1901657 P glycosyl compound metabolic process
978 O_TrvaMG11717_complete:A_TrvaMG_comp26175_c0_seq1
267bp
GO:0001523 P retinoid metabolic process
GO:0005215 F transporter activity
GO:0005502 F 11-cis retinal binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006776 P vitamin A metabolic process
GO:0006810 P transport
GO:0007601 P visual perception
GO:0016918 F retinal binding
GO:0019841 F retinol binding
GO:0044297 C cell body
GO:0050896 P response to stimulus
979 O_TrvaMG11718_complete:A_TrvaMG_comp26175_c0_seq2
267bp
GO:0001523 P retinoid metabolic process
GO:0005215 F transporter activity
GO:0005502 F 11-cis retinal binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006776 P vitamin A metabolic process
GO:0006810 P transport
GO:0007601 P visual perception
GO:0016918 F retinal binding
GO:0019841 F retinol binding
GO:0044297 C cell body
GO:0050896 P response to stimulus
980 O_TrvaMG1171_complete:A_TrvaMG_comp13084_c0_seq1
204bp
PREDICTED:_PRADC1-like_protein_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0007521 P muscle cell fate determination
981 O_TrvaMG11721_complete:A_TrvaMG_comp26177_c0_seq1
465bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
982 O_TrvaMG11724_complete:A_TrvaMG_comp26178_c0_seq1
301bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
983 O_TrvaMG11727_5prime_partial:A_TrvaMG_comp26179_c0_seq1
121bp
984 O_TrvaMG11729_complete:A_TrvaMG_comp26179_c0_seq2
326bp
985 O_TrvaMG1172_complete:A_TrvaMG_comp13089_c0_seq1
176bp
hypothetical_protein_KGM_19988_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0009267 P cellular response to starvation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016887 F ATP hydrolysis activity
GO:0046939 P nucleotide phosphorylation
986 O_TrvaMG11730_complete:A_TrvaMG_comp26179_c0_seq2
301bp
987 O_TrvaMG11733_complete:A_TrvaMG_comp26180_c0_seq1
1204bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008280 C cohesin complex
GO:0030893 C meiotic cohesin complex
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
988 O_TrvaMG11735_complete:A_TrvaMG_comp26182_c0_seq1
1033bp
GO:0004591 F oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006091 P generation of precursor metabolites and energy
GO:0006096 P glycolytic process
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016624 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 F thiamine pyrophosphate binding
GO:0031966 C mitochondrial membrane
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
989 O_TrvaMG1173_complete:A_TrvaMG_comp13091_c0_seq1
163bp
hypothetical_protein_KGM_18281_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
990 O_TrvaMG11740_complete:A_TrvaMG_comp26182_c0_seq2
1060bp
GO:0004591 F oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006091 P generation of precursor metabolites and energy
GO:0006096 P glycolytic process
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016624 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 F thiamine pyrophosphate binding
GO:0031966 C mitochondrial membrane
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
previous next from show/15605

- SilkBase 1999-2023 -