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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_TrvaMG10861_5prime_partial:A_TrvaMG_comp25969_c0_seq1
486bp
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
512 O_TrvaMG10864_internal:A_TrvaMG_comp25969_c3_seq1
160bp
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
513 O_TrvaMG10865_5prime_partial:A_TrvaMG_comp25971_c0_seq1
245bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
514 O_TrvaMG10866_complete:A_TrvaMG_comp25971_c0_seq2
896bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
515 O_TrvaMG10868_5prime_partial:A_TrvaMG_comp25973_c0_seq2
133bp
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0090149 P mitochondrial membrane fission
GO:1990613 P mitochondrial membrane fusion
516 O_TrvaMG1086_3prime_partial:A_TrvaMG_comp12946_c0_seq1
120bp
PREDICTED:_nucleolar_and_coiled-body_phosphoprotein_1_[Bombyx_mori]
517 O_TrvaMG10870_internal:A_TrvaMG_comp25974_c0_seq1
705bp
GO:0000123 C histone acetyltransferase complex
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002165 P instar larval or pupal development
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0035019 P somatic stem cell population maintenance
GO:0035207 P negative regulation of hemocyte proliferation
GO:0035222 P wing disc pattern formation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0036098 P male germ-line stem cell population maintenance
GO:0043486 P histone exchange
GO:0045747 P positive regulation of Notch signaling pathway
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0070983 P dendrite guidance
GO:2000637 P positive regulation of gene silencing by miRNA
518 O_TrvaMG10875_complete:A_TrvaMG_comp25975_c0_seq1
149bp
GO:0000002 P mitochondrial genome maintenance
GO:0000262 C mitochondrial chromosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006264 P mitochondrial DNA replication
519 O_TrvaMG10876_complete:A_TrvaMG_comp25976_c0_seq2
334bp
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
520 O_TrvaMG10878_complete:A_TrvaMG_comp25976_c0_seq3
340bp
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
521 O_TrvaMG1087_complete:A_TrvaMG_comp12947_c0_seq1
222bp
PREDICTED:_peroxisomal_membrane_protein_11C-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016559 P peroxisome fission
GO:0031231 C intrinsic component of peroxisomal membrane
GO:0043234 C protein-containing complex
GO:0044375 P regulation of peroxisome size
522 O_TrvaMG10880_internal:A_TrvaMG_comp25977_c0_seq1
376bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
523 O_TrvaMG10885_5prime_partial:A_TrvaMG_comp25977_c0_seq2
736bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
524 O_TrvaMG1088_complete:A_TrvaMG_comp12953_c0_seq1
296bp
carotenoid-binding_protein_[Bombyx_mandarina]
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
525 O_TrvaMG10893_internal:A_TrvaMG_comp25977_c1_seq1
568bp
526 O_TrvaMG10894_5prime_partial:A_TrvaMG_comp25979_c0_seq1
511bp
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016874 F ligase activity
GO:0023035 P CD40 signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0035631 C CD40 receptor complex
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0071797 C LUBAC complex
GO:0097039 P protein linear polyubiquitination
GO:1903955 P positive regulation of protein targeting to mitochondrion
527 O_TrvaMG10895_complete:A_TrvaMG_comp25979_c0_seq2
174bp
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016874 F ligase activity
GO:0023035 P CD40 signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0035631 C CD40 receptor complex
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0071797 C LUBAC complex
GO:0097039 P protein linear polyubiquitination
GO:1903955 P positive regulation of protein targeting to mitochondrion
528 O_TrvaMG10896_complete:A_TrvaMG_comp25979_c0_seq3
176bp
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016874 F ligase activity
GO:0023035 P CD40 signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0035631 C CD40 receptor complex
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0071797 C LUBAC complex
GO:0097039 P protein linear polyubiquitination
GO:1903955 P positive regulation of protein targeting to mitochondrion
529 O_TrvaMG10897_5prime_partial:A_TrvaMG_comp25979_c0_seq4
513bp
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010803 P regulation of tumor necrosis factor-mediated signaling pathway
GO:0016874 F ligase activity
GO:0023035 P CD40 signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0035631 C CD40 receptor complex
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0050852 P T cell receptor signaling pathway
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0071797 C LUBAC complex
GO:0097039 P protein linear polyubiquitination
GO:1903955 P positive regulation of protein targeting to mitochondrion
530 O_TrvaMG10898_internal:A_TrvaMG_comp25979_c1_seq1
226bp
531 O_TrvaMG1089_complete:A_TrvaMG_comp12953_c0_seq2
224bp
carotenoid-binding_protein_[Bombyx_mandarina]
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
532 O_TrvaMG108_3prime_partial:A_TrvaMG_comp11266_c0_seq1
164bp
PREDICTED:_serine/threonine-protein_kinase_MARK2-like_isoform_X9_[Bombyx_mori]
533 O_TrvaMG10900_complete:A_TrvaMG_comp25981_c0_seq2
636bp
GO:0000042 P protein localization to Golgi apparatus
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007409 P axonogenesis
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0051648 P vesicle localization
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0090161 P Golgi ribbon formation
534 O_TrvaMG10901_complete:A_TrvaMG_comp25981_c0_seq3
636bp
GO:0000042 P protein localization to Golgi apparatus
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007409 P axonogenesis
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0051648 P vesicle localization
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0090161 P Golgi ribbon formation
535 O_TrvaMG10902_complete:A_TrvaMG_comp25981_c0_seq4
636bp
GO:0000042 P protein localization to Golgi apparatus
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0007409 P axonogenesis
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0051648 P vesicle localization
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0090161 P Golgi ribbon formation
536 O_TrvaMG10904_3prime_partial:A_TrvaMG_comp25982_c0_seq1
220bp
GO:0000075 P cell cycle checkpoint signaling
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0007348 P regulation of syncytial blastoderm mitotic cell cycle
GO:0007349 P cellularization
GO:0007444 P imaginal disc development
GO:0009314 P response to radiation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016321 P female meiosis chromosome segregation
GO:0016740 F transferase activity
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0042060 P wound healing
GO:0051225 P spindle assembly
GO:0051299 P centrosome separation
537 O_TrvaMG10906_3prime_partial:A_TrvaMG_comp25982_c0_seq2
126bp
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0006975 P DNA damage induced protein phosphorylation
GO:0007049 P cell cycle
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0010767 P regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage
GO:0010972 P negative regulation of G2/M transition of mitotic cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018107 P peptidyl-threonine phosphorylation
GO:0035402 F histone kinase activity (H3-T11 specific)
GO:0035407 P histone H3-T11 phosphorylation
GO:0045839 P negative regulation of mitotic nuclear division
GO:0046602 P regulation of mitotic centrosome separation
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0071310 P cellular response to organic substance
GO:0071313 P cellular response to caffeine
GO:2000279 P negative regulation of DNA biosynthetic process
GO:2000615 P regulation of histone H3-K9 acetylation
538 O_TrvaMG10909_3prime_partial:A_TrvaMG_comp25985_c0_seq1
711bp
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0010494 C cytoplasmic stress granule
GO:0010608 P posttranscriptional regulation of gene expression
GO:0035613 F RNA stem-loop binding
GO:0042129 P regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0050863 P regulation of T cell activation
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0071347 P cellular response to interleukin-1
539 O_TrvaMG1090_complete:A_TrvaMG_comp12957_c0_seq1
193bp
PREDICTED:_uncharacterized_protein_LOC106135912_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0015266 F protein transmembrane transporter activity
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0031305 C integral component of mitochondrial inner membrane
540 O_TrvaMG10913_complete:A_TrvaMG_comp25986_c0_seq1
402bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
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