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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4171 O_TrvaMG17276_complete:A_TrvaMG_comp27207_c0_seq14
492bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
4172 O_TrvaMG17278_complete:A_TrvaMG_comp27207_c0_seq15
570bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
4173 O_TrvaMG1727_5prime_partial:A_TrvaMG_comp13717_c1_seq1
330bp
PREDICTED:_elongation_factor_Tu,_mitochondrial-like_[Pyrus_x_bretschneideri]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0016020 C membrane
GO:0042645 C mitochondrial nucleoid
GO:0043209 C myelin sheath
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0070125 P mitochondrial translational elongation
4174 O_TrvaMG17280_complete:A_TrvaMG_comp27207_c0_seq16
405bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
4175 O_TrvaMG17281_complete:A_TrvaMG_comp27207_c0_seq17
405bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
4176 O_TrvaMG17282_complete:A_TrvaMG_comp27207_c0_seq18
728bp
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
4177 O_TrvaMG17284_internal:A_TrvaMG_comp27209_c0_seq1
215bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031464 C Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
4178 O_TrvaMG17286_3prime_partial:A_TrvaMG_comp27209_c0_seq2
1012bp
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000717 P nucleotide-excision repair, DNA duplex unwinding
GO:0000784 C chromosome, telomeric region
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006293 P nucleotide-excision repair, preincision complex stabilization
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006295 P nucleotide-excision repair, DNA incision, 3'-to lesion
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0016032 P viral process
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0031464 C Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035518 P histone H2A monoubiquitination
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045070 P positive regulation of viral genome replication
GO:0046726 P positive regulation by virus of viral protein levels in host cell
GO:0051702 P biological process involved in interaction with symbiont
GO:0070062 C extracellular exosome
GO:0070911 P global genome nucleotide-excision repair
GO:0070914 P UV-damage excision repair
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1901990 P regulation of mitotic cell cycle phase transition
GO:1902188 P obsolete positive regulation of viral release from host cell
4179 O_TrvaMG1728_complete:A_TrvaMG_comp13718_c0_seq1
1347bp
PREDICTED:_axoneme-associated_protein_mst101(2)_[Bombyx_mori]
4180 O_TrvaMG17290_5prime_partial:A_TrvaMG_comp27209_c0_seq3
102bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031464 C Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
4181 O_TrvaMG17291_3prime_partial:A_TrvaMG_comp27210_c0_seq1
624bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4182 O_TrvaMG17295_5prime_partial:A_TrvaMG_comp27210_c2_seq1
223bp
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006486 P protein glycosylation
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018392 F glycoprotein 3-alpha-L-fucosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0033932 F 1,3-alpha-L-fucosidase activity
GO:0036071 P N-glycan fucosylation
GO:0046920 F alpha-(1->3)-fucosyltransferase activity
4183 O_TrvaMG17296_3prime_partial:A_TrvaMG_comp27210_c2_seq2
243bp
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006486 P protein glycosylation
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018392 F glycoprotein 3-alpha-L-fucosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0033932 F 1,3-alpha-L-fucosidase activity
GO:0036071 P N-glycan fucosylation
GO:0046920 F alpha-(1->3)-fucosyltransferase activity
4184 O_TrvaMG17297_3prime_partial:A_TrvaMG_comp27210_c2_seq2
108bp
4185 O_TrvaMG17298_complete:A_TrvaMG_comp27211_c0_seq1
807bp
GO:0001934 P positive regulation of protein phosphorylation
GO:0005158 F insulin receptor binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007528 P neuromuscular junction development
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030054 C cell junction
GO:0031594 C neuromuscular junction
GO:0035091 F phosphatidylinositol binding
GO:0043113 P receptor clustering
GO:0045202 C synapse
GO:0061098 P positive regulation of protein tyrosine kinase activity
4186 O_TrvaMG172_internal:A_TrvaMG_comp11396_c1_seq1
372bp
PREDICTED:_LOW_QUALITY_PROTEIN:_treacle_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030155 P regulation of cell adhesion
GO:0035507 P regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0042127 P regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000772 P regulation of cellular senescence
4187 O_TrvaMG17300_complete:A_TrvaMG_comp27213_c1_seq1
193bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0031647 P regulation of protein stability
GO:0043234 C protein-containing complex
GO:0043947 P obsolete positive regulation by host of symbiont catalytic activity
4188 O_TrvaMG17301_complete:A_TrvaMG_comp27213_c1_seq2
219bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0031647 P regulation of protein stability
GO:0043234 C protein-containing complex
GO:0043947 P obsolete positive regulation by host of symbiont catalytic activity
4189 O_TrvaMG17302_3prime_partial:A_TrvaMG_comp27214_c0_seq1
319bp
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
4190 O_TrvaMG17303_complete:A_TrvaMG_comp27215_c3_seq2
450bp
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0001662 P behavioral fear response
GO:0003009 P skeletal muscle contraction
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004711 F ribosomal protein S6 kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007281 P germ cell development
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0007616 P long-term memory
GO:0009408 P response to heat
GO:0009611 P response to wounding
GO:0009612 P response to mechanical stimulus
GO:0009636 P response to toxic substance
GO:0009749 P response to glucose
GO:0009986 C cell surface
GO:0010033 P response to organic substance
GO:0010243 P response to organonitrogen compound
GO:0014070 P response to organic cyclic compound
GO:0014732 P skeletal muscle atrophy
GO:0014878 P response to electrical stimulus involved in regulation of muscle adaptation
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0031929 P TOR signaling
GO:0032496 P response to lipopolysaccharide
GO:0032868 P response to insulin
GO:0032870 P cellular response to hormone stimulus
GO:0033574 P response to testosterone
GO:0033762 P response to glucagon
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043066 P negative regulation of apoptotic process
GO:0043200 P response to amino acid
GO:0043201 P response to leucine
GO:0043434 P response to peptide hormone
GO:0043491 P protein kinase B signaling
GO:0045202 C synapse
GO:0045471 P response to ethanol
GO:0045727 P positive regulation of translation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045948 P positive regulation of translational initiation
GO:0046324 P regulation of glucose import
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048633 P positive regulation of skeletal muscle tissue growth
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051384 P response to glucocorticoid
GO:0051721 F protein phosphatase 2A binding
GO:0071363 P cellular response to growth factor stimulus
GO:0071407 P cellular response to organic cyclic compound
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
4191 O_TrvaMG17304_complete:A_TrvaMG_comp27215_c3_seq6
392bp
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0001662 P behavioral fear response
GO:0003009 P skeletal muscle contraction
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004711 F ribosomal protein S6 kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007281 P germ cell development
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0007616 P long-term memory
GO:0009408 P response to heat
GO:0009611 P response to wounding
GO:0009612 P response to mechanical stimulus
GO:0009636 P response to toxic substance
GO:0009749 P response to glucose
GO:0009986 C cell surface
GO:0010033 P response to organic substance
GO:0010243 P response to organonitrogen compound
GO:0014070 P response to organic cyclic compound
GO:0014732 P skeletal muscle atrophy
GO:0014878 P response to electrical stimulus involved in regulation of muscle adaptation
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0031929 P TOR signaling
GO:0032496 P response to lipopolysaccharide
GO:0032868 P response to insulin
GO:0032870 P cellular response to hormone stimulus
GO:0033574 P response to testosterone
GO:0033762 P response to glucagon
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043066 P negative regulation of apoptotic process
GO:0043200 P response to amino acid
GO:0043201 P response to leucine
GO:0043434 P response to peptide hormone
GO:0043491 P protein kinase B signaling
GO:0045202 C synapse
GO:0045471 P response to ethanol
GO:0045727 P positive regulation of translation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045948 P positive regulation of translational initiation
GO:0046324 P regulation of glucose import
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048633 P positive regulation of skeletal muscle tissue growth
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051384 P response to glucocorticoid
GO:0051721 F protein phosphatase 2A binding
GO:0071363 P cellular response to growth factor stimulus
GO:0071407 P cellular response to organic cyclic compound
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
4192 O_TrvaMG17305_5prime_partial:A_TrvaMG_comp27216_c0_seq1
635bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4193 O_TrvaMG17307_5prime_partial:A_TrvaMG_comp27216_c0_seq2
583bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4194 O_TrvaMG17308_complete:A_TrvaMG_comp27216_c0_seq3
331bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4195 O_TrvaMG17309_complete:A_TrvaMG_comp27216_c0_seq4
588bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4196 O_TrvaMG17311_complete:A_TrvaMG_comp27216_c0_seq5
819bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4197 O_TrvaMG17312_5prime_partial:A_TrvaMG_comp27216_c0_seq6
1123bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4198 O_TrvaMG17314_5prime_partial:A_TrvaMG_comp27216_c0_seq7
481bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4199 O_TrvaMG17315_5prime_partial:A_TrvaMG_comp27216_c0_seq8
969bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4200 O_TrvaMG17316_complete:A_TrvaMG_comp27216_c0_seq10
1076bp
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
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