SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/15605
No. Name
Length
Chromosome No./Scaffold Id
Scaffold Length
BLAST (vs nr) Gene ontology
3451 O_TrvaMG15_internal:A_TrvaMG_comp2815_c0_seq1
129bp
GO:0005509 F calcium ion binding
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
3452 O_TrvaMG16000_complete:A_TrvaMG_comp27071_c0_seq4
1150bp
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005921 C gap junction
GO:0007049 P cell cycle
GO:0030054 C cell junction
GO:0051301 P cell division
3453 O_TrvaMG16006_complete:A_TrvaMG_comp27072_c0_seq2
220bp
3454 O_TrvaMG16008_5prime_partial:A_TrvaMG_comp27073_c0_seq1
627bp
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0055085 P transmembrane transport
3455 O_TrvaMG16009_complete:A_TrvaMG_comp27073_c0_seq2
179bp
GO:0000166 F nucleotide binding
GO:0001523 P retinoid metabolic process
GO:0001750 C photoreceptor outer segment
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005215 F transporter activity
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006649 P phospholipid transfer to membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007601 P visual perception
GO:0007603 P phototransduction, visible light
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045332 P phospholipid translocation
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0097381 C photoreceptor disc membrane
3456 O_TrvaMG1600_5prime_partial:A_TrvaMG_comp13558_c0_seq1
312bp
hypothetical_protein_BN871_AF_00160_[Paenibacillus_sp._P22]
3457 O_TrvaMG16011_5prime_partial:A_TrvaMG_comp27073_c0_seq4
440bp
3458 O_TrvaMG16013_complete:A_TrvaMG_comp27073_c0_seq5
281bp
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0055085 P transmembrane transport
3459 O_TrvaMG16014_5prime_partial:A_TrvaMG_comp27073_c0_seq7
358bp
3460 O_TrvaMG16016_5prime_partial:A_TrvaMG_comp27073_c0_seq9
552bp
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0055085 P transmembrane transport
3461 O_TrvaMG16017_complete:A_TrvaMG_comp27073_c0_seq10
280bp
GO:0000166 F nucleotide binding
GO:0002790 P peptide secretion
GO:0005102 F signaling receptor binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006497 P protein lipidation
GO:0006810 P transport
GO:0006911 P phagocytosis, engulfment
GO:0007040 P lysosome organization
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007584 P response to nutrient
GO:0008203 P cholesterol metabolic process
GO:0008509 F anion transmembrane transporter activity
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0010875 P positive regulation of cholesterol efflux
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019905 F syntaxin binding
GO:0030139 C endocytic vesicle
GO:0030301 P cholesterol transport
GO:0030819 P obsolete positive regulation of cAMP biosynthetic process
GO:0031267 F small GTPase binding
GO:0032367 P intracellular cholesterol transport
GO:0032489 P regulation of Cdc42 protein signal transduction
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0034185 F apolipoprotein binding
GO:0034186 F apolipoprotein A-I binding
GO:0034188 F apolipoprotein A-I receptor activity
GO:0034364 C high-density lipoprotein particle
GO:0034380 P high-density lipoprotein particle assembly
GO:0034616 P response to laminar fluid shear stress
GO:0038027 P apolipoprotein A-I-mediated signaling pathway
GO:0042157 P lipoprotein metabolic process
GO:0042158 P lipoprotein biosynthetic process
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043231 C intracellular membrane-bounded organelle
GO:0043691 P reverse cholesterol transport
GO:0045121 C membrane raft
GO:0045332 P phospholipid translocation
GO:0045335 C phagocytic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0050702 P interleukin-1 beta production
GO:0051117 F ATPase binding
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055098 P cellular response to low-density lipoprotein particle stimulus
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:0060155 P platelet dense granule organization
GO:0071222 P cellular response to lipopolysaccharide
GO:0071300 P cellular response to retinoic acid
GO:0071397 P cellular response to cholesterol
GO:0098656 P anion transmembrane transport
3462 O_TrvaMG16018_5prime_partial:A_TrvaMG_comp27073_c0_seq11
440bp
3463 O_TrvaMG16019_complete:A_TrvaMG_comp27073_c0_seq11
179bp
GO:0000166 F nucleotide binding
GO:0001523 P retinoid metabolic process
GO:0001750 C photoreceptor outer segment
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005215 F transporter activity
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006649 P phospholipid transfer to membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007601 P visual perception
GO:0007603 P phototransduction, visible light
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045332 P phospholipid translocation
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0097381 C photoreceptor disc membrane
3464 O_TrvaMG16020_complete:A_TrvaMG_comp27073_c0_seq12
382bp
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0055085 P transmembrane transport
3465 O_TrvaMG16021_5prime_partial:A_TrvaMG_comp27073_c0_seq13
728bp
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031288 P sorocarp morphogenesis
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0055085 P transmembrane transport
3466 O_TrvaMG16022_complete:A_TrvaMG_comp27073_c0_seq14
171bp
3467 O_TrvaMG16023_5prime_partial:A_TrvaMG_comp27073_c0_seq15
440bp
3468 O_TrvaMG16024_complete:A_TrvaMG_comp27073_c0_seq15
280bp
GO:0000166 F nucleotide binding
GO:0002790 P peptide secretion
GO:0005102 F signaling receptor binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006497 P protein lipidation
GO:0006810 P transport
GO:0006911 P phagocytosis, engulfment
GO:0007040 P lysosome organization
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007584 P response to nutrient
GO:0008203 P cholesterol metabolic process
GO:0008509 F anion transmembrane transporter activity
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0010875 P positive regulation of cholesterol efflux
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019905 F syntaxin binding
GO:0030139 C endocytic vesicle
GO:0030301 P cholesterol transport
GO:0030819 P obsolete positive regulation of cAMP biosynthetic process
GO:0031267 F small GTPase binding
GO:0032367 P intracellular cholesterol transport
GO:0032489 P regulation of Cdc42 protein signal transduction
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0034185 F apolipoprotein binding
GO:0034186 F apolipoprotein A-I binding
GO:0034188 F apolipoprotein A-I receptor activity
GO:0034364 C high-density lipoprotein particle
GO:0034380 P high-density lipoprotein particle assembly
GO:0034616 P response to laminar fluid shear stress
GO:0038027 P apolipoprotein A-I-mediated signaling pathway
GO:0042157 P lipoprotein metabolic process
GO:0042158 P lipoprotein biosynthetic process
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043231 C intracellular membrane-bounded organelle
GO:0043691 P reverse cholesterol transport
GO:0045121 C membrane raft
GO:0045332 P phospholipid translocation
GO:0045335 C phagocytic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0050702 P interleukin-1 beta production
GO:0051117 F ATPase binding
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055098 P cellular response to low-density lipoprotein particle stimulus
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:0060155 P platelet dense granule organization
GO:0071222 P cellular response to lipopolysaccharide
GO:0071300 P cellular response to retinoic acid
GO:0071397 P cellular response to cholesterol
GO:0098656 P anion transmembrane transport
3469 O_TrvaMG16025_complete:A_TrvaMG_comp27074_c0_seq1
591bp
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0003823 F antigen binding
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006461 P protein-containing complex assembly
GO:0007059 P chromosome segregation
GO:0007143 P female meiotic nuclear division
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051232 P meiotic spindle elongation
GO:0051306 P mitotic sister chromatid separation
GO:0051754 P meiotic sister chromatid cohesion, centromeric
GO:0070062 C extracellular exosome
GO:0070262 P peptidyl-serine dephosphorylation
GO:1903538 P regulation of meiotic cell cycle process involved in oocyte maturation
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
3470 O_TrvaMG16026_complete:A_TrvaMG_comp27074_c0_seq1
309bp
3471 O_TrvaMG16029_complete:A_TrvaMG_comp27074_c0_seq2
591bp
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0003823 F antigen binding
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006461 P protein-containing complex assembly
GO:0007059 P chromosome segregation
GO:0007143 P female meiotic nuclear division
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051232 P meiotic spindle elongation
GO:0051306 P mitotic sister chromatid separation
GO:0051754 P meiotic sister chromatid cohesion, centromeric
GO:0070062 C extracellular exosome
GO:0070262 P peptidyl-serine dephosphorylation
GO:1903538 P regulation of meiotic cell cycle process involved in oocyte maturation
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
3472 O_TrvaMG16030_complete:A_TrvaMG_comp27074_c0_seq2
321bp
3473 O_TrvaMG16032_3prime_partial:A_TrvaMG_comp27074_c0_seq3
271bp
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0003823 F antigen binding
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006461 P protein-containing complex assembly
GO:0007059 P chromosome segregation
GO:0007143 P female meiotic nuclear division
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051232 P meiotic spindle elongation
GO:0051306 P mitotic sister chromatid separation
GO:0051754 P meiotic sister chromatid cohesion, centromeric
GO:0070062 C extracellular exosome
GO:0070262 P peptidyl-serine dephosphorylation
GO:1903538 P regulation of meiotic cell cycle process involved in oocyte maturation
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
3474 O_TrvaMG16033_complete:A_TrvaMG_comp27076_c0_seq1
335bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
3475 O_TrvaMG16034_complete:A_TrvaMG_comp27077_c0_seq1
393bp
GO:0000166 F nucleotide binding
GO:0000831 F inositol hexakisphosphate 6-kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0032958 P inositol phosphate biosynthetic process
GO:0046488 P phosphatidylinositol metabolic process
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3476 O_TrvaMG16037_complete:A_TrvaMG_comp27077_c0_seq2
326bp
GO:0000166 F nucleotide binding
GO:0000831 F inositol hexakisphosphate 6-kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0032958 P inositol phosphate biosynthetic process
GO:0046488 P phosphatidylinositol metabolic process
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3477 O_TrvaMG16038_complete:A_TrvaMG_comp27077_c0_seq2
178bp
GO:0000166 F nucleotide binding
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030308 P negative regulation of cell growth
GO:0043065 P positive regulation of apoptotic process
GO:0045111 C intermediate filament cytoskeleton
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3478 O_TrvaMG16041_complete:A_TrvaMG_comp27077_c0_seq4
519bp
GO:0000166 F nucleotide binding
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006817 P phosphate ion transport
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030308 P negative regulation of cell growth
GO:0043065 P positive regulation of apoptotic process
GO:0045111 C intermediate filament cytoskeleton
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3479 O_TrvaMG16044_complete:A_TrvaMG_comp27077_c0_seq5
326bp
GO:0000166 F nucleotide binding
GO:0000831 F inositol hexakisphosphate 6-kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0032958 P inositol phosphate biosynthetic process
GO:0046488 P phosphatidylinositol metabolic process
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3480 O_TrvaMG16047_complete:A_TrvaMG_comp27077_c0_seq6
326bp
GO:0000166 F nucleotide binding
GO:0000831 F inositol hexakisphosphate 6-kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0032958 P inositol phosphate biosynthetic process
GO:0046488 P phosphatidylinositol metabolic process
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
previous next from show/15605

- SilkBase 1999-2023 -