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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3181 O_TrvaMG15535_complete:A_TrvaMG_comp27003_c1_seq6
377bp
GO:0005515 F protein binding
3182 O_TrvaMG15536_complete:A_TrvaMG_comp27004_c0_seq2
122bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
3183 O_TrvaMG15537_complete:A_TrvaMG_comp27004_c0_seq3
394bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
3184 O_TrvaMG15539_complete:A_TrvaMG_comp27004_c0_seq4
394bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
3185 O_TrvaMG15540_complete:A_TrvaMG_comp27004_c0_seq4
141bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
3186 O_TrvaMG15541_complete:A_TrvaMG_comp27004_c0_seq6
451bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
3187 O_TrvaMG15543_complete:A_TrvaMG_comp27004_c0_seq8
488bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
3188 O_TrvaMG15545_complete:A_TrvaMG_comp27004_c0_seq10
141bp
GO:0000049 F tRNA binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
3189 O_TrvaMG15546_complete:A_TrvaMG_comp27005_c0_seq1
137bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3190 O_TrvaMG15547_5prime_partial:A_TrvaMG_comp27005_c0_seq2
443bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3191 O_TrvaMG15548_complete:A_TrvaMG_comp27005_c0_seq3
557bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3192 O_TrvaMG15549_complete:A_TrvaMG_comp27005_c0_seq4
434bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3193 O_TrvaMG1554_complete:A_TrvaMG_comp13508_c0_seq1
631bp
putative_ATPase_family_AAA_domain-containing_protein_3_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042645 C mitochondrial nucleoid
3194 O_TrvaMG15550_5prime_partial:A_TrvaMG_comp27005_c0_seq5
566bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3195 O_TrvaMG15551_complete:A_TrvaMG_comp27005_c0_seq6
434bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3196 O_TrvaMG15552_complete:A_TrvaMG_comp27005_c0_seq7
557bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
3197 O_TrvaMG15553_complete:A_TrvaMG_comp27006_c0_seq1
948bp
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3198 O_TrvaMG15554_5prime_partial:A_TrvaMG_comp27006_c0_seq1
203bp
3199 O_TrvaMG15556_3prime_partial:A_TrvaMG_comp27006_c0_seq2
395bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
3200 O_TrvaMG15557_5prime_partial:A_TrvaMG_comp27006_c0_seq2
203bp
3201 O_TrvaMG15558_complete:A_TrvaMG_comp27007_c0_seq1
530bp
GO:0000166 F nucleotide binding
GO:0004856 F xylulokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0005998 P xylulose catabolic process
GO:0006091 P generation of precursor metabolites and energy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019640 P glucuronate catabolic process to xylulose 5-phosphate
GO:0042732 P D-xylose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
3202 O_TrvaMG15560_3prime_partial:A_TrvaMG_comp27008_c0_seq2
430bp
3203 O_TrvaMG15563_3prime_partial:A_TrvaMG_comp27008_c0_seq5
400bp
3204 O_TrvaMG15564_5prime_partial:A_TrvaMG_comp27008_c0_seq5
383bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3205 O_TrvaMG15565_3prime_partial:A_TrvaMG_comp27008_c0_seq6
430bp
3206 O_TrvaMG15567_3prime_partial:A_TrvaMG_comp27008_c0_seq7
400bp
3207 O_TrvaMG15568_5prime_partial:A_TrvaMG_comp27008_c0_seq7
383bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3208 O_TrvaMG15569_complete:A_TrvaMG_comp27008_c0_seq8
322bp
3209 O_TrvaMG15571_complete:A_TrvaMG_comp27008_c0_seq9
322bp
3210 O_TrvaMG15573_5prime_partial:A_TrvaMG_comp27008_c0_seq10
114bp
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