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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2281 O_TrvaMG13955_complete:A_TrvaMG_comp26750_c1_seq4
1089bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2282 O_TrvaMG13957_complete:A_TrvaMG_comp26750_c1_seq5
709bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2283 O_TrvaMG13958_complete:A_TrvaMG_comp26750_c1_seq5
344bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2284 O_TrvaMG1395_internal:A_TrvaMG_comp13399_c0_seq1
358bp
PREDICTED:_uncharacterized_protein_LOC101746904_[Bombyx_mori]
2285 O_TrvaMG13960_complete:A_TrvaMG_comp26750_c1_seq6
709bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2286 O_TrvaMG13961_complete:A_TrvaMG_comp26750_c1_seq6
474bp
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0006461 P protein-containing complex assembly
GO:0008380 P RNA splicing
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2287 O_TrvaMG13964_complete:A_TrvaMG_comp26750_c1_seq7
709bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2288 O_TrvaMG13966_complete:A_TrvaMG_comp26750_c1_seq8
709bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2289 O_TrvaMG13967_complete:A_TrvaMG_comp26750_c1_seq8
474bp
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0006461 P protein-containing complex assembly
GO:0008380 P RNA splicing
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2290 O_TrvaMG13969_complete:A_TrvaMG_comp26751_c0_seq1
350bp
2291 O_TrvaMG13970_complete:A_TrvaMG_comp26751_c0_seq2
1006bp
2292 O_TrvaMG13971_complete:A_TrvaMG_comp26751_c0_seq3
998bp
2293 O_TrvaMG13972_complete:A_TrvaMG_comp26751_c0_seq4
342bp
2294 O_TrvaMG13973_complete:A_TrvaMG_comp26751_c0_seq5
505bp
2295 O_TrvaMG13974_complete:A_TrvaMG_comp26752_c0_seq1
275bp
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
2296 O_TrvaMG13975_complete:A_TrvaMG_comp26752_c0_seq2
211bp
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
2297 O_TrvaMG13976_complete:A_TrvaMG_comp26752_c0_seq3
252bp
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
2298 O_TrvaMG13977_complete:A_TrvaMG_comp26752_c0_seq4
215bp
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
2299 O_TrvaMG13978_complete:A_TrvaMG_comp26752_c0_seq5
279bp
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
2300 O_TrvaMG13979_complete:A_TrvaMG_comp26752_c0_seq6
248bp
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
2301 O_TrvaMG13980_3prime_partial:A_TrvaMG_comp26753_c0_seq1
937bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2302 O_TrvaMG13983_3prime_partial:A_TrvaMG_comp26753_c0_seq2
937bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2303 O_TrvaMG13986_3prime_partial:A_TrvaMG_comp26753_c0_seq3
399bp
GO:0002011 P morphogenesis of an epithelial sheet
GO:0002162 F dystroglycan binding
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005913 C adherens junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016323 C basolateral plasma membrane
GO:0016340 P calcium-dependent cell-matrix adhesion
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0032403 F protein-containing complex binding
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0042802 F identical protein binding
GO:0043034 C costamere
GO:0043409 P negative regulation of MAPK cascade
GO:0043434 P response to peptide hormone
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
2304 O_TrvaMG13987_3prime_partial:A_TrvaMG_comp26753_c0_seq4
399bp
GO:0002011 P morphogenesis of an epithelial sheet
GO:0002162 F dystroglycan binding
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005913 C adherens junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016323 C basolateral plasma membrane
GO:0016340 P calcium-dependent cell-matrix adhesion
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0032403 F protein-containing complex binding
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0042802 F identical protein binding
GO:0043034 C costamere
GO:0043409 P negative regulation of MAPK cascade
GO:0043434 P response to peptide hormone
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
2305 O_TrvaMG13988_3prime_partial:A_TrvaMG_comp26753_c0_seq5
945bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2306 O_TrvaMG1398_internal:A_TrvaMG_comp13399_c0_seq2
364bp
PREDICTED:_uncharacterized_protein_LOC101746904_[Bombyx_mori]
2307 O_TrvaMG13991_3prime_partial:A_TrvaMG_comp26753_c0_seq6
945bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2308 O_TrvaMG13994_5prime_partial:A_TrvaMG_comp26753_c1_seq1
193bp
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2309 O_TrvaMG13995_complete:A_TrvaMG_comp26754_c0_seq1
1028bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
2310 O_TrvaMG13996_complete:A_TrvaMG_comp26754_c0_seq4
901bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0019483 P beta-alanine biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
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