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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1771 O_TrvaMG13066_complete:A_TrvaMG_comp26546_c0_seq4
499bp
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
1772 O_TrvaMG13067_complete:A_TrvaMG_comp26546_c0_seq5
499bp
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
1773 O_TrvaMG13068_complete:A_TrvaMG_comp26546_c0_seq6
499bp
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
1774 O_TrvaMG1306_complete:A_TrvaMG_comp13309_c0_seq1
438bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101745803_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1775 O_TrvaMG13071_complete:A_TrvaMG_comp26548_c0_seq1
430bp
GO:0005634 C nucleus
GO:0046872 F metal ion binding
1776 O_TrvaMG13073_3prime_partial:A_TrvaMG_comp26548_c0_seq2
294bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1777 O_TrvaMG13074_complete:A_TrvaMG_comp26549_c0_seq1
331bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1778 O_TrvaMG13076_complete:A_TrvaMG_comp26549_c0_seq2
426bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1779 O_TrvaMG13078_complete:A_TrvaMG_comp26549_c0_seq3
125bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1780 O_TrvaMG13079_complete:A_TrvaMG_comp26549_c0_seq4
349bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1781 O_TrvaMG1307_complete:A_TrvaMG_comp13310_c0_seq1
517bp
PREDICTED:_succinyl-CoA:3-ketoacid_coenzyme_A_transferase_1,_mitochondrial_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008260 F 3-oxoacid CoA-transferase activity
GO:0008410 F CoA-transferase activity
GO:0009725 P response to hormone
GO:0014823 P response to activity
GO:0016740 F transferase activity
GO:0035774 P positive regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0042182 P ketone catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0042594 P response to starvation
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046950 P cellular ketone body metabolic process
GO:0046952 P ketone body catabolic process
GO:0060612 P adipose tissue development
1782 O_TrvaMG13081_complete:A_TrvaMG_comp26549_c0_seq5
302bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1783 O_TrvaMG13083_complete:A_TrvaMG_comp26549_c0_seq7
455bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1784 O_TrvaMG13085_complete:A_TrvaMG_comp26549_c0_seq8
320bp
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1785 O_TrvaMG13088_complete:A_TrvaMG_comp26550_c0_seq2
158bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1786 O_TrvaMG1308_complete:A_TrvaMG_comp13312_c0_seq1
1712bp
PREDICTED:_brefeldin_A-inhibited_guanine_nucleotide-exchange_protein_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007030 P Golgi organization
GO:0010256 P endomembrane system organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0017022 F myosin binding
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0030837 P negative regulation of actin filament polymerization
GO:0031175 P neuron projection development
GO:0032012 P regulation of ARF protein signal transduction
GO:0034237 F protein kinase A regulatory subunit binding
GO:0034260 P negative regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:0051897 P positive regulation of protein kinase B signaling
GO:0090284 P positive regulation of protein glycosylation in Golgi
GO:0090303 P positive regulation of wound healing
GO:2000114 P regulation of establishment of cell polarity
1787 O_TrvaMG13092_complete:A_TrvaMG_comp26550_c0_seq5
158bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1788 O_TrvaMG13094_complete:A_TrvaMG_comp26550_c0_seq6
158bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1789 O_TrvaMG13097_complete:A_TrvaMG_comp26550_c0_seq8
158bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1790 O_TrvaMG1309_complete:A_TrvaMG_comp13312_c0_seq1
375bp
suppressor_of_profilin_2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0015629 C actin cytoskeleton
GO:0030833 P regulation of actin filament polymerization
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0036195 C muscle cell projection membrane
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
1791 O_TrvaMG13103_5prime_partial:A_TrvaMG_comp26552_c0_seq1
1239bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
1792 O_TrvaMG13105_complete:A_TrvaMG_comp26552_c0_seq3
1211bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
1793 O_TrvaMG13107_5prime_partial:A_TrvaMG_comp26553_c0_seq2
125bp
1794 O_TrvaMG13108_5prime_partial:A_TrvaMG_comp26553_c0_seq3
167bp
1795 O_TrvaMG13109_5prime_partial:A_TrvaMG_comp26553_c0_seq4
146bp
1796 O_TrvaMG13110_5prime_partial:A_TrvaMG_comp26553_c0_seq5
201bp
1797 O_TrvaMG13111_complete:A_TrvaMG_comp26555_c1_seq1
595bp
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
1798 O_TrvaMG13114_complete:A_TrvaMG_comp26555_c1_seq2
322bp
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
1799 O_TrvaMG13116_3prime_partial:A_TrvaMG_comp26556_c0_seq1
322bp
1800 O_TrvaMG13118_internal:A_TrvaMG_comp26556_c1_seq1
440bp
GO:0005215 F transporter activity
GO:0005765 C lysosomal membrane
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0007286 P spermatid development
GO:0008283 P cell population proliferation
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030318 P melanocyte differentiation
GO:0033162 C melanosome membrane
GO:0042438 P melanin biosynthetic process
GO:0043473 P pigmentation
GO:0048066 P developmental pigmentation
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
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