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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1561 O_TrvaMG1273_complete:A_TrvaMG_comp13256_c0_seq1
376bp
putative_ELAV-like_protein_1_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0017091 F mRNA 3'-UTR AU-rich region binding
1562 O_TrvaMG12741_complete:A_TrvaMG_comp26450_c0_seq3
139bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019784 F NEDD8-specific protease activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0071108 P protein K48-linked deubiquitination
1563 O_TrvaMG12742_5prime_partial:A_TrvaMG_comp26451_c0_seq1
195bp
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0002168 P instar larval development
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0004003 F DNA helicase activity
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007004 P telomere maintenance via telomerase
GO:0007049 P cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008104 P protein localization
GO:0008408 F 3'-5' exonuclease activity
GO:0016233 P telomere capping
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030870 C Mre11 complex
GO:0032508 P DNA duplex unwinding
GO:0035861 C site of double-strand break
GO:0043047 F single-stranded telomeric DNA binding
GO:0046872 F metal ion binding
GO:0046939 P nucleotide phosphorylation
GO:0051276 P chromosome organization
GO:0051321 P meiotic cell cycle
GO:0051880 F G-quadruplex DNA binding
GO:0070192 P chromosome organization involved in meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1564 O_TrvaMG12743_internal:A_TrvaMG_comp26451_c0_seq2
774bp
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000019 P regulation of mitotic recombination
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0004003 F DNA helicase activity
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007004 P telomere maintenance via telomerase
GO:0007049 P cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0007346 P regulation of mitotic cell cycle
GO:0008408 F 3'-5' exonuclease activity
GO:0016020 C membrane
GO:0016233 P telomere capping
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030674 F protein-macromolecule adaptor activity
GO:0030870 C Mre11 complex
GO:0031860 P telomeric 3' overhang formation
GO:0031954 P positive regulation of protein autophosphorylation
GO:0032206 P positive regulation of telomere maintenance
GO:0032508 P DNA duplex unwinding
GO:0033674 P positive regulation of kinase activity
GO:0035861 C site of double-strand break
GO:0043047 F single-stranded telomeric DNA binding
GO:0045120 C pronucleus
GO:0046872 F metal ion binding
GO:0046939 P nucleotide phosphorylation
GO:0051276 P chromosome organization
GO:0051321 P meiotic cell cycle
GO:0051880 F G-quadruplex DNA binding
GO:0070192 P chromosome organization involved in meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1904354 P negative regulation of telomere capping
1565 O_TrvaMG12744_3prime_partial:A_TrvaMG_comp26451_c1_seq1
344bp
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0002168 P instar larval development
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0004003 F DNA helicase activity
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007004 P telomere maintenance via telomerase
GO:0007049 P cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008104 P protein localization
GO:0008408 F 3'-5' exonuclease activity
GO:0016233 P telomere capping
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030870 C Mre11 complex
GO:0032508 P DNA duplex unwinding
GO:0035861 C site of double-strand break
GO:0043047 F single-stranded telomeric DNA binding
GO:0046872 F metal ion binding
GO:0046939 P nucleotide phosphorylation
GO:0051276 P chromosome organization
GO:0051321 P meiotic cell cycle
GO:0051880 F G-quadruplex DNA binding
GO:0070192 P chromosome organization involved in meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1566 O_TrvaMG12746_complete:A_TrvaMG_comp26453_c0_seq1
1577bp
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1567 O_TrvaMG12750_5prime_partial:A_TrvaMG_comp26453_c0_seq2
796bp
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1568 O_TrvaMG12753_complete:A_TrvaMG_comp26454_c0_seq3
207bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
1569 O_TrvaMG12754_5prime_partial:A_TrvaMG_comp26455_c0_seq1
405bp
1570 O_TrvaMG12755_complete:A_TrvaMG_comp26456_c1_seq1
319bp
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032469 P endoplasmic reticulum calcium ion homeostasis
GO:0044325 F transmembrane transporter binding
GO:1902236 P negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
1571 O_TrvaMG12757_5prime_partial:A_TrvaMG_comp26458_c1_seq2
530bp
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
1572 O_TrvaMG12759_complete:A_TrvaMG_comp26460_c0_seq1
413bp
1573 O_TrvaMG12760_5prime_partial:A_TrvaMG_comp26461_c0_seq1
536bp
1574 O_TrvaMG12761_3prime_partial:A_TrvaMG_comp26461_c0_seq2
113bp
1575 O_TrvaMG12762_3prime_partial:A_TrvaMG_comp26461_c0_seq3
112bp
1576 O_TrvaMG12763_complete:A_TrvaMG_comp26462_c0_seq1
932bp
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
1577 O_TrvaMG12764_complete:A_TrvaMG_comp26462_c0_seq2
857bp
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
1578 O_TrvaMG12765_5prime_partial:A_TrvaMG_comp26463_c0_seq1
328bp
GO:0001878 P response to yeast
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
1579 O_TrvaMG12766_complete:A_TrvaMG_comp26464_c0_seq1
487bp
GO:0003977 F UDP-N-acetylglucosamine diphosphorylase activity
GO:0005829 C cytosol
GO:0006048 P UDP-N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070569 F uridylyltransferase activity
1580 O_TrvaMG12768_3prime_partial:A_TrvaMG_comp26465_c0_seq1
528bp
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1581 O_TrvaMG1276_complete:A_TrvaMG_comp13258_c0_seq1
123bp
prefoldin_beta_subunit_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
GO:0051131 P chaperone-mediated protein complex assembly
1582 O_TrvaMG12770_5prime_partial:A_TrvaMG_comp26465_c0_seq2
386bp
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1583 O_TrvaMG12772_3prime_partial:A_TrvaMG_comp26465_c0_seq3
511bp
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1584 O_TrvaMG12774_5prime_partial:A_TrvaMG_comp26465_c0_seq4
422bp
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
1585 O_TrvaMG12778_complete:A_TrvaMG_comp26468_c0_seq1
813bp
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006936 P muscle contraction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042383 C sarcolemma
1586 O_TrvaMG1277_complete:A_TrvaMG_comp13259_c0_seq1
867bp
PREDICTED:_probable_leucine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
1587 O_TrvaMG12780_complete:A_TrvaMG_comp26468_c0_seq2
813bp
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006936 P muscle contraction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042383 C sarcolemma
1588 O_TrvaMG12782_complete:A_TrvaMG_comp26469_c0_seq1
469bp
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
1589 O_TrvaMG12786_complete:A_TrvaMG_comp26469_c0_seq2
439bp
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
1590 O_TrvaMG12787_complete:A_TrvaMG_comp26469_c0_seq2
167bp
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
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