SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/26102
No. Name
Length
Chromosome No./Scaffold Id
Scaffold Length
BLAST (vs nr) Gene ontology
9871 O_TrvaFAMAMG24791_complete:A_TrvaFAMAMG_TR21652c3_g2_i1
321bp
RGS-GAIP_interacting_protein_GIPC_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0006605 P protein targeting
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0012506 C vesicle membrane
GO:0014047 P glutamate secretion
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017022 F myosin binding
GO:0030139 C endocytic vesicle
GO:0030165 F PDZ domain binding
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031647 P regulation of protein stability
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032467 P positive regulation of cytokinesis
GO:0042803 F protein homodimerization activity
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0043542 P endothelial cell migration
GO:0048167 P regulation of synaptic plasticity
GO:0070062 C extracellular exosome
9872 O_TrvaFAMAMG24792_internal:A_TrvaFAMAMG_TR21653c1_g1_i1
744bp
Rootletin_[Papilio_xuthus]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
9873 O_TrvaFAMAMG24793_internal:A_TrvaFAMAMG_TR21653c1_g2_i1
1110bp
Rootletin_[Papilio_xuthus]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
9874 O_TrvaFAMAMG24795_internal:A_TrvaFAMAMG_TR21653c2_g1_i1
483bp
PREDICTED:_rootletin_[Amyelois_transitella]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
9875 O_TrvaFAMAMG24797_5prime_partial:A_TrvaFAMAMG_TR21653c2_g2_i1
861bp
PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
9876 O_TrvaFAMAMG24799_5prime_partial:A_TrvaFAMAMG_TR21653c2_g2_i2
594bp
PREDICTED:_rootletin_[Amyelois_transitella]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
9877 O_TrvaFAMAMG2479_complete:A_TrvaFAMAMG_TR3366c0_g1_i4
143bp
PREDICTED:_fasciclin-1_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
9878 O_TrvaFAMAMG247_5prime_partial:A_TrvaFAMAMG_TR526c0_g1_i1
186bp
growth_arrest-specific_protein_2_[Bombyx_mori]
9879 O_TrvaFAMAMG24800_complete:A_TrvaFAMAMG_TR21653c2_g2_i2
262bp
PREDICTED:_rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
9880 O_TrvaFAMAMG24802_5prime_partial:A_TrvaFAMAMG_TR21654c0_g1_i1
5238bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042065 P glial cell growth
GO:0042066 P perineurial glial growth
GO:0043186 C P granule
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
9881 O_TrvaFAMAMG24807_5prime_partial:A_TrvaFAMAMG_TR21654c0_g1_i2
5261bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042065 P glial cell growth
GO:0042066 P perineurial glial growth
GO:0043186 C P granule
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
9882 O_TrvaFAMAMG2480_5prime_partial:A_TrvaFAMAMG_TR3366c0_g1_i5
692bp
PREDICTED:_fasciclin-1_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
9883 O_TrvaFAMAMG24811_complete:A_TrvaFAMAMG_TR21655c1_g1_i1
1102bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
9884 O_TrvaFAMAMG24813_complete:A_TrvaFAMAMG_TR21655c1_g1_i2
1108bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
9885 O_TrvaFAMAMG24815_complete:A_TrvaFAMAMG_TR21655c1_g1_i3
1103bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
9886 O_TrvaFAMAMG24818_complete:A_TrvaFAMAMG_TR21655c1_g1_i4
1103bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
9887 O_TrvaFAMAMG24820_complete:A_TrvaFAMAMG_TR21655c1_g1_i5
1109bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
9888 O_TrvaFAMAMG24822_complete:A_TrvaFAMAMG_TR21655c1_g1_i6
1109bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019903 F protein phosphatase binding
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0033269 C internode region of axon
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0044295 C axonal growth cone
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0051301 P cell division
GO:0060341 P regulation of cellular localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
9889 O_TrvaFAMAMG24825_complete:A_TrvaFAMAMG_TR21656c1_g1_i1
577bp
PREDICTED:_protein_RUFY3_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030175 C filopodium
GO:0030335 P positive regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0042995 C cell projection
GO:0043204 C perikaryon
GO:0045773 P positive regulation of axon extension
GO:0050771 P negative regulation of axonogenesis
GO:0071437 C obsolete invadopodium
GO:0090316 P positive regulation of intracellular protein transport
GO:2000114 P regulation of establishment of cell polarity
9890 O_TrvaFAMAMG24826_5prime_partial:A_TrvaFAMAMG_TR21656c1_g1_i2
683bp
PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9891 O_TrvaFAMAMG24828_complete:A_TrvaFAMAMG_TR21656c1_g1_i3
151bp
PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9892 O_TrvaFAMAMG2482_internal:A_TrvaFAMAMG_TR3366c0_g2_i1
372bp
PREDICTED:_fasciclin-1_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
9893 O_TrvaFAMAMG24830_complete:A_TrvaFAMAMG_TR21656c1_g1_i4
107bp
PREDICTED:_protein_RUFY3_isoform_X4_[Bombyx_mori]
9894 O_TrvaFAMAMG24831_complete:A_TrvaFAMAMG_TR21656c1_g1_i5
243bp
PREDICTED:_protein_RUFY3_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9895 O_TrvaFAMAMG24832_complete:A_TrvaFAMAMG_TR21656c1_g1_i6
227bp
PREDICTED:_protein_RUFY3_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9896 O_TrvaFAMAMG24833_complete:A_TrvaFAMAMG_TR21656c1_g1_i7
657bp
PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9897 O_TrvaFAMAMG24835_5prime_partial:A_TrvaFAMAMG_TR21656c1_g1_i8
567bp
PREDICTED:_protein_RUFY3_isoform_X2_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9898 O_TrvaFAMAMG24836_complete:A_TrvaFAMAMG_TR21656c1_g1_i9
167bp
PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9899 O_TrvaFAMAMG24838_5prime_partial:A_TrvaFAMAMG_TR21656c1_g1_i10
647bp
PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
9900 O_TrvaFAMAMG24840_complete:A_TrvaFAMAMG_TR21656c1_g1_i11
307bp
PREDICTED:_RUN_and_FYVE_domain-containing_protein_2_isoform_X5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
previous next from show/26102

- SilkBase 1999-2023 -