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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6691 O_TrvaFAMAMG20036_complete:A_TrvaFAMAMG_TR17113c0_g1_i2
517bp
PREDICTED:_CUGBP_Elav-like_family_member_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
6692 O_TrvaFAMAMG20039_complete:A_TrvaFAMAMG_TR17113c0_g1_i3
505bp
PREDICTED:_CUGBP_Elav-like_family_member_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
6693 O_TrvaFAMAMG2003_complete:A_TrvaFAMAMG_TR3021c0_g1_i1
235bp
PREDICTED:_sorting_nexin-17_isoform_X3_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
6694 O_TrvaFAMAMG20043_complete:A_TrvaFAMAMG_TR17114c0_g1_i1
418bp
PREDICTED:_golgin-45_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005796 C Golgi lumen
GO:0006810 P transport
GO:0007030 P Golgi organization
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0019899 F enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0043001 P Golgi to plasma membrane protein transport
6695 O_TrvaFAMAMG20044_3prime_partial:A_TrvaFAMAMG_TR17115c0_g1_i1
1008bp
PREDICTED:_mucin-17_[Papilio_xuthus]
6696 O_TrvaFAMAMG20046_complete:A_TrvaFAMAMG_TR17116c0_g1_i1
368bp
PREDICTED:_CD82_antigen-like_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
6697 O_TrvaFAMAMG20047_3prime_partial:A_TrvaFAMAMG_TR17117c0_g1_i1
166bp
leucine-rich_repeat_G_protein-coupled_receptor_precursor_[Bombyx_mori]
6698 O_TrvaFAMAMG20049_complete:A_TrvaFAMAMG_TR17117c0_g2_i1
178bp
leucine-rich_repeat_G_protein-coupled_receptor_precursor_[Bombyx_mori]
6699 O_TrvaFAMAMG2004_complete:A_TrvaFAMAMG_TR3021c0_g1_i3
482bp
PREDICTED:_sorting_nexin-17_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
6700 O_TrvaFAMAMG20051_complete:A_TrvaFAMAMG_TR17117c0_g3_i1
732bp
leucine-rich_repeat_G_protein-coupled_receptor_precursor_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004964 F luteinizing hormone receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007189 P adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0007190 P activation of adenylate cyclase activity
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0008528 F G protein-coupled peptide receptor activity
GO:0009755 P hormone-mediated signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016500 F protein-hormone receptor activity
GO:0022602 P ovulation cycle process
GO:0042700 P luteinizing hormone signaling pathway
GO:0043950 P positive regulation of cAMP-mediated signaling
GO:0046546 P development of primary male sexual characteristics
6701 O_TrvaFAMAMG20053_5prime_partial:A_TrvaFAMAMG_TR17118c0_g1_i1
828bp
PREDICTED:_uncharacterized_protein_LOC101738218_[Bombyx_mori]
6702 O_TrvaFAMAMG20054_5prime_partial:A_TrvaFAMAMG_TR17118c0_g1_i2
903bp
PREDICTED:_uncharacterized_protein_LOC101738218_[Bombyx_mori]
6703 O_TrvaFAMAMG20055_internal:A_TrvaFAMAMG_TR17118c0_g2_i1
207bp
PREDICTED:_uncharacterized_protein_LOC101738218_[Bombyx_mori]
6704 O_TrvaFAMAMG20056_complete:A_TrvaFAMAMG_TR17119c0_g1_i1
963bp
PREDICTED:_activating_transcription_factor_7-interacting_protein_1_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016032 P viral process
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
6705 O_TrvaFAMAMG20057_complete:A_TrvaFAMAMG_TR17119c0_g1_i2
963bp
PREDICTED:_activating_transcription_factor_7-interacting_protein_1_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016032 P viral process
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
6706 O_TrvaFAMAMG20058_3prime_partial:A_TrvaFAMAMG_TR17120c0_g1_i1
230bp
integrin_alpha-IIb-like_precursor_[Bombyx_mori]
6707 O_TrvaFAMAMG20059_5prime_partial:A_TrvaFAMAMG_TR17120c1_g1_i1
231bp
integrin_alpha-IIb-like_precursor_[Bombyx_mori]
6708 O_TrvaFAMAMG2005_complete:A_TrvaFAMAMG_TR3021c0_g1_i4
286bp
PREDICTED:_sorting_nexin-17_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
6709 O_TrvaFAMAMG20060_internal:A_TrvaFAMAMG_TR17120c2_g1_i1
359bp
integrin_alpha-IIb-like_precursor_[Bombyx_mori]
GO:0005518 F collagen binding
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008305 C integrin complex
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030593 P neutrophil chemotaxis
GO:0034679 C integrin alpha9-beta1 complex
GO:0042060 P wound healing
GO:0043236 F laminin binding
GO:0046872 F metal ion binding
6710 O_TrvaFAMAMG20061_complete:A_TrvaFAMAMG_TR17121c0_g1_i1
375bp
hypothetical_protein_KGM_20642_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000784 C chromosome, telomeric region
GO:0000993 F RNA polymerase II complex binding
GO:0001711 P endodermal cell fate commitment
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006378 P mRNA polyadenylation
GO:0007049 P cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0010390 P histone monoubiquitination
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0019827 P stem cell population maintenance
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031442 P positive regulation of mRNA 3'-end processing
GO:0031648 P protein destabilization
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0033523 P histone H2B ubiquitination
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048147 P negative regulation of fibroblast proliferation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0071222 P cellular response to lipopolysaccharide
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
6711 O_TrvaFAMAMG20062_complete:A_TrvaFAMAMG_TR17121c0_g1_i2
548bp
hypothetical_protein_KGM_20642_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000784 C chromosome, telomeric region
GO:0000993 F RNA polymerase II complex binding
GO:0001711 P endodermal cell fate commitment
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006378 P mRNA polyadenylation
GO:0007049 P cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0010390 P histone monoubiquitination
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0019827 P stem cell population maintenance
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031442 P positive regulation of mRNA 3'-end processing
GO:0031648 P protein destabilization
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0033523 P histone H2B ubiquitination
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048147 P negative regulation of fibroblast proliferation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0071222 P cellular response to lipopolysaccharide
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
6712 O_TrvaFAMAMG20063_5prime_partial:A_TrvaFAMAMG_TR17123c0_g1_i1
163bp
PREDICTED:_uncharacterized_protein_LOC101737345_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0030132 C clathrin coat of coated pit
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
6713 O_TrvaFAMAMG20064_3prime_partial:A_TrvaFAMAMG_TR17123c0_g1_i1
142bp
PREDICTED:_uncharacterized_protein_LOC101737345_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0006897 P endocytosis
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0017124 F SH3 domain binding
GO:0019065 P receptor-mediated endocytosis of virus by host cell
GO:0030122 C AP-2 adaptor complex
GO:0030132 C clathrin coat of coated pit
GO:0030136 C clathrin-coated vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031901 C early endosome membrane
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0048268 P clathrin coat assembly
GO:0060170 C ciliary membrane
6714 O_TrvaFAMAMG20067_internal:A_TrvaFAMAMG_TR17123c0_g1_i2
285bp
PREDICTED:_uncharacterized_protein_LOC101737345_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0030132 C clathrin coat of coated pit
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
6715 O_TrvaFAMAMG2006_complete:A_TrvaFAMAMG_TR3021c0_g1_i4
188bp
PREDICTED:_sorting_nexin-17_isoform_X3_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:1990126 P endocytic recycling
6716 O_TrvaFAMAMG20070_3prime_partial:A_TrvaFAMAMG_TR17124c0_g1_i1
178bp
6717 O_TrvaFAMAMG20071_internal:A_TrvaFAMAMG_TR17124c1_g1_i1
151bp
6718 O_TrvaFAMAMG20073_5prime_partial:A_TrvaFAMAMG_TR17124c1_g2_i1
141bp
6719 O_TrvaFAMAMG20074_3prime_partial:A_TrvaFAMAMG_TR17125c0_g1_i1
122bp
low_molecular_mass_30_kDa_lipoprotein_19G1-like_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
6720 O_TrvaFAMAMG20076_complete:A_TrvaFAMAMG_TR17125c0_g2_i1
259bp
PREDICTED:_hemolymph_protein_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
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