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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

5221

O_TrvaFAMAMG17750_complete:A_TrvaFAMAMG_TR14951c0_g1_i4

120bp

5222

O_TrvaFAMAMG17751_complete:A_TrvaFAMAMG_TR14952c0_g1_i1

488bp

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Papilio_polytes]

GO:0005215	F	transporter activity
GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0008643	P	carbohydrate transport
GO:0015574	F	trehalose transmembrane transporter activity
GO:0015767	P	lactose transport
GO:0015768	P	maltose transport
GO:0015770	P	sucrose transport
GO:0015771	P	trehalose transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022857	F	transmembrane transporter activity
GO:0022891	F	transmembrane transporter activity
GO:0055085	P	transmembrane transport

5223

O_TrvaFAMAMG17753_complete:A_TrvaFAMAMG_TR14952c0_g3_i1

364bp

Facilitated_trehalose_transporter_Tret1,_partial_[Papilio_machaon]

GO:0005215	F	transporter activity
GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0008643	P	carbohydrate transport
GO:0015574	F	trehalose transmembrane transporter activity
GO:0015771	P	trehalose transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0022857	F	transmembrane transporter activity
GO:0022891	F	transmembrane transporter activity
GO:0055085	P	transmembrane transport

5224

O_TrvaFAMAMG17754_internal:A_TrvaFAMAMG_TR14954c0_g1_i1

104bp

PREDICTED:_uncharacterized_protein_LOC105841681_isoform_X2_[Bombyx_mori]

5225

O_TrvaFAMAMG17755_complete:A_TrvaFAMAMG_TR14955c0_g1_i1

267bp

PREDICTED:_sepiapterin_reductase_[Bombyx_mori]

GO:0004757	F	sepiapterin reductase activity
GO:0005737	C	cytoplasm
GO:0006729	P	tetrahydrobiopterin biosynthetic process
GO:0008152	P	metabolic process
GO:0016491	F	oxidoreductase activity
GO:0055114	P	obsolete oxidation-reduction process

5226

O_TrvaFAMAMG17757_complete:A_TrvaFAMAMG_TR14956c0_g2_i1

170bp

hypothetical_protein_KGM_18113_[Danaus_plexippus]

5227

O_TrvaFAMAMG17758_complete:A_TrvaFAMAMG_TR14958c0_g1_i1

331bp

PREDICTED:_DNA_repair_protein_RAD51_homolog_4_isoform_X2_[Bombyx_mori]

GO:0000150	F	DNA strand exchange activity
GO:0000166	F	nucleotide binding
GO:0000400	F	four-way junction DNA binding
GO:0000707	P	meiotic DNA recombinase assembly
GO:0000722	P	telomere maintenance via recombination
GO:0000723	P	telomere maintenance
GO:0000724	P	double-strand break repair via homologous recombination
GO:0000781	C	chromosome, telomeric region
GO:0000784	C	chromosome, telomeric region
GO:0003677	F	DNA binding
GO:0003690	F	double-stranded DNA binding
GO:0003697	F	single-stranded DNA binding
GO:0004520	F	endodeoxyribonuclease activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005657	C	replication fork
GO:0005694	C	chromosome
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0006281	P	DNA repair
GO:0006289	P	nucleotide-excision repair
GO:0006310	P	DNA recombination
GO:0006312	P	mitotic recombination
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007131	P	reciprocal meiotic recombination
GO:0008094	F	ATP-dependent activity, acting on DNA
GO:0010212	P	response to ionizing radiation
GO:0033063	C	Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0036297	P	interstrand cross-link repair
GO:0042148	P	strand invasion
GO:0043015	F	gamma-tubulin binding
GO:0051276	P	chromosome organization
GO:0051726	P	regulation of cell cycle

5228

O_TrvaFAMAMG17759_complete:A_TrvaFAMAMG_TR14958c0_g2_i1

175bp

PREDICTED:_DNA_repair_protein_RAD51_homolog_4_[Papilio_machaon]

5229

O_TrvaFAMAMG1775_internal:A_TrvaFAMAMG_TR2959c1_g2_i1

121bp

PREDICTED:_probable_tRNA_N6-adenosine_threonylcarbamoyltransferase,_mitochondrial_[Amyelois_transitella]

GO:0000408	C	EKC/KEOPS complex
GO:0002949	P	tRNA threonylcarbamoyladenosine modification
GO:0004222	F	metalloendopeptidase activity
GO:0005739	C	mitochondrion
GO:0006508	P	proteolysis
GO:0008033	P	tRNA processing
GO:0016740	F	transferase activity
GO:0016746	F	acyltransferase activity
GO:0046872	F	metal ion binding
GO:0061711	F	N(6)-L-threonylcarbamoyladenine synthase activity

5230

O_TrvaFAMAMG17760_complete:A_TrvaFAMAMG_TR14958c0_g3_i1

175bp

PREDICTED:_DNA_repair_protein_RAD51_homolog_4_[Papilio_machaon]

5231

O_TrvaFAMAMG17762_complete:A_TrvaFAMAMG_TR14960c0_g1_i1

367bp

PREDICTED:_homeobox_protein_extradenticle_isoform_X3_[Amyelois_transitella]

GO:0000060	P	obsolete protein import into nucleus, translocation
GO:0001654	P	eye development
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005634	C	nucleus
GO:0005667	C	transcription regulator complex
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0007275	P	multicellular organism development
GO:0007422	P	peripheral nervous system development
GO:0043565	F	sequence-specific DNA binding

5232

O_TrvaFAMAMG17765_complete:A_TrvaFAMAMG_TR14961c0_g1_i1

382bp

PREDICTED:_uncharacterized_protein_LOC101741884_[Bombyx_mori]

5233

O_TrvaFAMAMG17766_complete:A_TrvaFAMAMG_TR14963c0_g1_i1

476bp

PREDICTED:_suppressor_of_fused_homolog_[Papilio_machaon]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0001501	P	skeletal system development
GO:0001843	P	neural tube closure
GO:0001947	P	heart looping
GO:0003281	P	ventricular septum development
GO:0003714	F	transcription corepressor activity
GO:0004871	F	obsolete signal transducer activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005929	C	cilium
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006508	P	proteolysis
GO:0007165	P	signal transduction
GO:0007275	P	multicellular organism development
GO:0007368	P	determination of left/right symmetry
GO:0008013	F	beta-catenin binding
GO:0008134	F	transcription factor binding
GO:0019901	F	protein kinase binding
GO:0021513	P	spinal cord dorsal/ventral patterning
GO:0021775	P	smoothened signaling pathway involved in ventral spinal cord interneuron specification
GO:0021776	P	smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
GO:0035904	P	aorta development
GO:0042992	P	obsolete negative regulation of transcription factor import into nucleus
GO:0042994	P	cytoplasmic sequestering of transcription factor
GO:0043433	P	negative regulation of DNA-binding transcription factor activity
GO:0043588	P	skin development
GO:0045668	P	negative regulation of osteoblast differentiation
GO:0045879	P	negative regulation of smoothened signaling pathway
GO:0060976	P	coronary vasculature development
GO:0072372	C	cilium
GO:0097542	C	ciliary tip
GO:0097546	C	ciliary base
GO:1901621	P	negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:2000059	P	negative regulation of ubiquitin-dependent protein catabolic process

5234

O_TrvaFAMAMG17767_complete:A_TrvaFAMAMG_TR14963c0_g2_i1

153bp

PREDICTED:_suppressor_of_fused_homolog_[Papilio_machaon]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0001843	P	neural tube closure
GO:0001947	P	heart looping
GO:0003281	P	ventricular septum development
GO:0003714	F	transcription corepressor activity
GO:0004871	F	obsolete signal transducer activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005929	C	cilium
GO:0007275	P	multicellular organism development
GO:0007368	P	determination of left/right symmetry
GO:0008013	F	beta-catenin binding
GO:0008134	F	transcription factor binding
GO:0019901	F	protein kinase binding
GO:0021513	P	spinal cord dorsal/ventral patterning
GO:0021775	P	smoothened signaling pathway involved in ventral spinal cord interneuron specification
GO:0021776	P	smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
GO:0035904	P	aorta development
GO:0042994	P	cytoplasmic sequestering of transcription factor
GO:0043433	P	negative regulation of DNA-binding transcription factor activity
GO:0043588	P	skin development
GO:0045879	P	negative regulation of smoothened signaling pathway
GO:0060976	P	coronary vasculature development
GO:0072372	C	cilium
GO:1901621	P	negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:2000059	P	negative regulation of ubiquitin-dependent protein catabolic process

5235

O_TrvaFAMAMG17768_internal:A_TrvaFAMAMG_TR14964c0_g1_i1

814bp

ORF2_[Bombyx_mori]

5236

O_TrvaFAMAMG17769_internal:A_TrvaFAMAMG_TR14964c0_g1_i2

227bp

PREDICTED:_uncharacterized_protein_LOC101741598_[Bombyx_mori]

GO:0000287	F	magnesium ion binding
GO:0003676	F	nucleic acid binding
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0005737	C	cytoplasm
GO:0006401	P	RNA catabolic process
GO:0016787	F	hydrolase activity
GO:0046872	F	metal ion binding
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic

5237

O_TrvaFAMAMG1776_complete:A_TrvaFAMAMG_TR2960c0_g1_i1

347bp

will_die_slowly_[Danaus_plexippus]

GO:0004402	F	histone acetyltransferase activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005671	C	obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005875	C	microtubule associated complex
GO:0006338	P	chromatin remodeling
GO:0007095	P	mitotic G2 DNA damage checkpoint signaling
GO:0016573	P	histone acetylation
GO:0022008	P	neurogenesis
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0044545	C	NSL complex
GO:0044665	C	MLL1/2 complex
GO:0044666	C	MLL3/4 complex
GO:0048188	C	Set1C/COMPASS complex
GO:0051568	P	histone H3-K4 methylation

5238

O_TrvaFAMAMG17770_complete:A_TrvaFAMAMG_TR14965c0_g1_i1

339bp

PREDICTED:_transmembrane_protein_183_isoform_X2_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0008150	P	biological_process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane

5239

O_TrvaFAMAMG17771_5prime_partial:A_TrvaFAMAMG_TR14966c0_g1_i1

345bp

PREDICTED:_telomerase_Cajal_body_protein_1_[Amyelois_transitella]

GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005697	C	telomerase holoenzyme complex
GO:0005737	C	cytoplasm
GO:0007004	P	telomere maintenance via telomerase
GO:0015030	C	Cajal body
GO:0032203	P	telomere formation via telomerase
GO:0032212	P	positive regulation of telomere maintenance via telomerase
GO:0032403	F	protein-containing complex binding
GO:0051087	F	chaperone binding
GO:0051973	P	positive regulation of telomerase activity
GO:0070034	F	telomerase RNA binding
GO:0070200	P	establishment of protein localization to telomere
GO:0090666	P	scaRNA localization to Cajal body
GO:0090671	P	telomerase RNA localization to Cajal body
GO:1904851	P	positive regulation of establishment of protein localization to telomere
GO:1904867	P	protein localization to Cajal body

5240

O_TrvaFAMAMG17772_3prime_partial:A_TrvaFAMAMG_TR14966c1_g1_i1

112bp

Telomerase_Cajal_body_protein_1_[Operophtera_brumata]

GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005697	C	telomerase holoenzyme complex
GO:0005737	C	cytoplasm
GO:0007004	P	telomere maintenance via telomerase
GO:0015030	C	Cajal body
GO:0032203	P	telomere formation via telomerase
GO:0032212	P	positive regulation of telomere maintenance via telomerase
GO:0032403	F	protein-containing complex binding
GO:0051087	F	chaperone binding
GO:0051973	P	positive regulation of telomerase activity
GO:0070034	F	telomerase RNA binding
GO:0070200	P	establishment of protein localization to telomere
GO:0090666	P	scaRNA localization to Cajal body
GO:0090671	P	telomerase RNA localization to Cajal body
GO:1904851	P	positive regulation of establishment of protein localization to telomere
GO:1904867	P	protein localization to Cajal body

5241

O_TrvaFAMAMG17773_complete:A_TrvaFAMAMG_TR14967c0_g2_i1

468bp

PREDICTED:_RING_finger_and_transmembrane_domain-containing_protein_2_[Amyelois_transitella]

GO:0008270	F	zinc ion binding
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0046872	F	metal ion binding

5242

O_TrvaFAMAMG17774_3prime_partial:A_TrvaFAMAMG_TR14969c0_g1_i1

442bp

PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]

5243

O_TrvaFAMAMG17776_complete:A_TrvaFAMAMG_TR14969c0_g2_i1

1169bp

PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]

5244

O_TrvaFAMAMG17777_complete:A_TrvaFAMAMG_TR14971c1_g1_i1

1338bp

PREDICTED:_splicing_factor_3B_subunit_1_[Amyelois_transitella]

GO:0005634	C	nucleus
GO:0005681	C	spliceosomal complex
GO:0006397	P	mRNA processing
GO:0008380	P	RNA splicing

5245

O_TrvaFAMAMG1777_complete:A_TrvaFAMAMG_TR2961c0_g1_i1

430bp

hypothetical_protein_KGM_01859_[Danaus_plexippus]

GO:0005509	F	calcium ion binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0007275	P	multicellular organism development
GO:0016020	C	membrane
GO:0016055	P	Wnt signaling pathway
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0046872	F	metal ion binding

5246

O_TrvaFAMAMG17781_complete:A_TrvaFAMAMG_TR14975c0_g1_i1

610bp