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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3421 O_TrvaFAMAMG1520_complete:A_TrvaFAMAMG_TR2317c0_g1_i2
517bp
PREDICTED:_uncharacterized_protein_LOC101736053_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007368 P determination of left/right symmetry
GO:0008589 P regulation of smoothened signaling pathway
GO:0010669 P epithelial structure maintenance
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035058 P non-motile cilium assembly
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0048706 P embryonic skeletal system development
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0060271 P cilium assembly
GO:0060322 P head development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061009 P common bile duct development
GO:1901620 P regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:1903887 P motile cilium assembly
GO:1990403 P embryonic brain development
GO:2000095 P regulation of Wnt signaling pathway, planar cell polarity pathway
3422 O_TrvaFAMAMG15211_complete:A_TrvaFAMAMG_TR12009c0_g1_i4
847bp
PREDICTED:_ribosome-binding_protein_1_isoform_X6_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3423 O_TrvaFAMAMG15214_complete:A_TrvaFAMAMG_TR12009c0_g1_i5
881bp
PREDICTED:_ribosome-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3424 O_TrvaFAMAMG15218_complete:A_TrvaFAMAMG_TR12009c0_g1_i6
873bp
PREDICTED:_kinectin_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3425 O_TrvaFAMAMG1521_5prime_partial:A_TrvaFAMAMG_TR2318c0_g2_i1
237bp
PREDICTED:_uncharacterized_protein_LOC101741984_[Bombyx_mori]
3426 O_TrvaFAMAMG15222_complete:A_TrvaFAMAMG_TR12009c0_g1_i7
812bp
PREDICTED:_ribosome-binding_protein_1_isoform_X6_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3427 O_TrvaFAMAMG15225_complete:A_TrvaFAMAMG_TR12009c0_g1_i8
812bp
PREDICTED:_ribosome-binding_protein_1_isoform_X6_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3428 O_TrvaFAMAMG15228_complete:A_TrvaFAMAMG_TR12009c0_g1_i9
846bp
PREDICTED:_kinectin_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3429 O_TrvaFAMAMG15232_complete:A_TrvaFAMAMG_TR12009c0_g1_i10
785bp
PREDICTED:_ribosome-binding_protein_1_isoform_X6_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3430 O_TrvaFAMAMG15235_complete:A_TrvaFAMAMG_TR12009c0_g1_i11
847bp
PREDICTED:_ribosome-binding_protein_1_isoform_X6_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3431 O_TrvaFAMAMG15238_complete:A_TrvaFAMAMG_TR12009c0_g1_i12
873bp
PREDICTED:_kinectin_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3432 O_TrvaFAMAMG15242_complete:A_TrvaFAMAMG_TR12009c0_g1_i13
908bp
PREDICTED:_ribosome-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3433 O_TrvaFAMAMG15246_complete:A_TrvaFAMAMG_TR12009c0_g1_i14
820bp
PREDICTED:_ribosome-binding_protein_1_isoform_X6_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007018 P microtubule-based movement
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
3434 O_TrvaFAMAMG15249_complete:A_TrvaFAMAMG_TR12010c0_g2_i1
385bp
PREDICTED:_U2_small_nuclear_ribonucleoprotein_auxiliary_factor_35_kDa_subunit-related_protein_2_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0089701 C U2AF complex
3435 O_TrvaFAMAMG1524_3prime_partial:A_TrvaFAMAMG_TR2318c0_g3_i1
179bp
3436 O_TrvaFAMAMG15250_internal:A_TrvaFAMAMG_TR12013c0_g1_i1
133bp
putative_Rho_GTPase_activating_protein_11A_isoform_2_isoform_1_[Operophtera_brumata]
3437 O_TrvaFAMAMG15251_complete:A_TrvaFAMAMG_TR12016c0_g1_i1
468bp
PREDICTED:_WD_repeat-containing_protein_37_[Amyelois_transitella]
3438 O_TrvaFAMAMG15252_complete:A_TrvaFAMAMG_TR12016c0_g1_i2
318bp
PREDICTED:_WD_repeat-containing_protein_37_isoform_X2_[Bombyx_mori]
3439 O_TrvaFAMAMG15253_complete:A_TrvaFAMAMG_TR12026c0_g2_i1
241bp
RRP15-like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3440 O_TrvaFAMAMG15255_complete:A_TrvaFAMAMG_TR12026c0_g2_i2
260bp
RRP15-like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3441 O_TrvaFAMAMG15257_3prime_partial:A_TrvaFAMAMG_TR12026c0_g3_i1
196bp
RRP15-like_protein_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0022008 P neurogenesis
3442 O_TrvaFAMAMG15259_internal:A_TrvaFAMAMG_TR12036c1_g1_i1
458bp
hypothetical_protein_KGM_15403_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3443 O_TrvaFAMAMG15260_complete:A_TrvaFAMAMG_TR12037c0_g1_i1
138bp
Major_facilitator_superfamily_domain-containing_protein_10_[Papilio_xuthus]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0008493 F tetracycline transmembrane transporter activity
GO:0008514 F organic anion transmembrane transporter activity
GO:0015904 P tetracycline transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031526 C brush border membrane
GO:0043252 P sodium-independent organic anion transport
GO:0055085 P transmembrane transport
3444 O_TrvaFAMAMG15262_complete:A_TrvaFAMAMG_TR12037c0_g2_i1
477bp
PREDICTED:_major_facilitator_superfamily_domain-containing_protein_10-like_[Bombyx_mori]
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0008493 F tetracycline transmembrane transporter activity
GO:0008514 F organic anion transmembrane transporter activity
GO:0015904 P tetracycline transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031526 C brush border membrane
GO:0043252 P sodium-independent organic anion transport
GO:0055085 P transmembrane transport
3445 O_TrvaFAMAMG15265_complete:A_TrvaFAMAMG_TR12038c0_g1_i1
142bp
PREDICTED:_homeobox_protein_ceh-24_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0043565 F sequence-specific DNA binding
3446 O_TrvaFAMAMG15267_complete:A_TrvaFAMAMG_TR12040c0_g1_i1
185bp
hypothetical_protein_KGM_09767_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006629 P lipid metabolic process
GO:0017053 C transcription repressor complex
GO:0046872 F metal ion binding
3447 O_TrvaFAMAMG15268_complete:A_TrvaFAMAMG_TR12040c0_g1_i2
324bp
PREDICTED:_juxtaposed_with_another_zinc_finger_protein_1_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006629 P lipid metabolic process
GO:0017053 C transcription repressor complex
GO:0046872 F metal ion binding
3448 O_TrvaFAMAMG15270_complete:A_TrvaFAMAMG_TR12040c0_g1_i3
223bp
PREDICTED:_juxtaposed_with_another_zinc_finger_protein_1_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006629 P lipid metabolic process
GO:0017053 C transcription repressor complex
GO:0046872 F metal ion binding
3449 O_TrvaFAMAMG15271_internal:A_TrvaFAMAMG_TR12047c0_g1_i1
304bp
PREDICTED:_helicase_POLQ-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0016787 F hydrolase activity
3450 O_TrvaFAMAMG15272_3prime_partial:A_TrvaFAMAMG_TR12047c0_g2_i1
221bp
PREDICTED:_helicase_POLQ-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0016787 F hydrolase activity
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