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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3031 O_TrvaFAMAMG14616_5prime_partial:A_TrvaFAMAMG_TR11779c0_g1_i1
703bp
PREDICTED:_polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005704 C polytene chromosome band
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008283 P cell population proliferation
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070734 P histone H3-K27 methylation
GO:2001229 P negative regulation of response to gamma radiation
3032 O_TrvaFAMAMG14618_complete:A_TrvaFAMAMG_TR11779c0_g1_i2
287bp
PREDICTED:_polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005704 C polytene chromosome band
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008283 P cell population proliferation
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070734 P histone H3-K27 methylation
GO:2001229 P negative regulation of response to gamma radiation
3033 O_TrvaFAMAMG14619_5prime_partial:A_TrvaFAMAMG_TR11779c0_g1_i3
775bp
PREDICTED:_polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016574 P histone ubiquitination
GO:0031490 F chromatin DNA binding
GO:0032993 C protein-DNA complex
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0043565 F sequence-specific DNA binding
GO:0045596 P negative regulation of cell differentiation
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0046872 F metal ion binding
3034 O_TrvaFAMAMG14622_3prime_partial:A_TrvaFAMAMG_TR11781c0_g2_i1
118bp
3035 O_TrvaFAMAMG14623_complete:A_TrvaFAMAMG_TR11781c0_g2_i2
286bp
hypothetical_protein_KGM_04852_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
3036 O_TrvaFAMAMG14624_3prime_partial:A_TrvaFAMAMG_TR11781c0_g2_i2
118bp
3037 O_TrvaFAMAMG14625_complete:A_TrvaFAMAMG_TR11783c0_g1_i1
1256bp
PREDICTED:_UHRF1-binding_protein_1-like_isoform_X1_[Bombyx_mori]
3038 O_TrvaFAMAMG1462_complete:A_TrvaFAMAMG_TR2292c0_g1_i1
382bp
putative_G_protein-coupled_receptor_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0009881 F photoreceptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0018298 P protein-chromophore linkage
GO:0050896 P response to stimulus
3039 O_TrvaFAMAMG14630_complete:A_TrvaFAMAMG_TR11785c0_g1_i1
775bp
PREDICTED:_lysine-specific_histone_demethylase_1A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001701 P in utero embryonic development
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006482 P protein demethylation
GO:0007275 P multicellular organism development
GO:0007596 P blood coagulation
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0010725 P regulation of primitive erythrocyte differentiation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0019899 F enzyme binding
GO:0021983 P pituitary gland development
GO:0030374 F nuclear receptor coactivator activity
GO:0030851 P granulocyte differentiation
GO:0032091 P negative regulation of protein binding
GO:0032451 F demethylase activity
GO:0032452 F histone demethylase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0033184 P positive regulation of histone ubiquitination
GO:0034644 P cellular response to UV
GO:0034648 F obsolete histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034720 P histone H3-K4 demethylation
GO:0042162 F telomeric DNA binding
GO:0043234 C protein-containing complex
GO:0043392 P negative regulation of DNA binding
GO:0043426 F MRF binding
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044212 F transcription cis-regulatory region binding
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046886 P positive regulation of hormone biosynthetic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050681 F androgen receptor binding
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051573 P negative regulation of histone H3-K9 methylation
GO:0055001 P muscle cell development
GO:0055114 P obsolete oxidation-reduction process
GO:0061752 F telomeric repeat-containing RNA binding
GO:0071480 P cellular response to gamma radiation
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:1903827 P regulation of protein localization
GO:1990391 C DNA repair complex
GO:2000179 P positive regulation of neural precursor cell proliferation
GO:2000648 P positive regulation of stem cell proliferation
3040 O_TrvaFAMAMG14631_3prime_partial:A_TrvaFAMAMG_TR11786c0_g1_i1
786bp
PREDICTED:_uncharacterized_protein_LOC101744657_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0042594 P response to starvation
GO:0044351 P macropinocytosis
3041 O_TrvaFAMAMG14635_complete:A_TrvaFAMAMG_TR11786c0_g3_i1
798bp
PREDICTED:_uncharacterized_protein_LOC101744657_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0042594 P response to starvation
GO:0044351 P macropinocytosis
3042 O_TrvaFAMAMG14638_complete:A_TrvaFAMAMG_TR11787c0_g1_i1
384bp
PREDICTED:_uncharacterized_protein_LOC106118012_isoform_X1_[Papilio_xuthus]
3043 O_TrvaFAMAMG14639_complete:A_TrvaFAMAMG_TR11787c0_g1_i2
471bp
PREDICTED:_uncharacterized_protein_LOC106118012_isoform_X2_[Papilio_xuthus]
GO:0005737 C cytoplasm
3044 O_TrvaFAMAMG14640_complete:A_TrvaFAMAMG_TR11787c0_g1_i3
488bp
PREDICTED:_uncharacterized_protein_LOC106109791_[Papilio_polytes]
GO:0005737 C cytoplasm
3045 O_TrvaFAMAMG14641_complete:A_TrvaFAMAMG_TR11788c0_g1_i1
234bp
homothorax,_isoform_F_[Danaus_plexippus]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007525 P somatic muscle development
GO:0008134 F transcription factor binding
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0034504 P protein localization to nucleus
GO:0035282 P segmentation
GO:0035326 F cis-regulatory region sequence-specific DNA binding
GO:0042659 P regulation of cell fate specification
GO:0045664 P regulation of neuron differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0060323 P head morphogenesis
GO:0090098 P positive regulation of BMP signaling pathway
3046 O_TrvaFAMAMG14642_complete:A_TrvaFAMAMG_TR11788c0_g2_i1
434bp
homeobox_protein_homothorax-like_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007525 P somatic muscle development
GO:0008134 F transcription factor binding
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0034504 P protein localization to nucleus
GO:0035282 P segmentation
GO:0035326 F cis-regulatory region sequence-specific DNA binding
GO:0042659 P regulation of cell fate specification
GO:0045664 P regulation of neuron differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0060323 P head morphogenesis
GO:0090098 P positive regulation of BMP signaling pathway
3047 O_TrvaFAMAMG14645_complete:A_TrvaFAMAMG_TR11790c0_g1_i1
321bp
putative_WD_repeat_domain_45_[Danaus_plexippus]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
3048 O_TrvaFAMAMG14647_complete:A_TrvaFAMAMG_TR11790c0_g2_i1
168bp
putative_WD_repeat_domain_45_[Danaus_plexippus]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
3049 O_TrvaFAMAMG14649_complete:A_TrvaFAMAMG_TR11792c0_g1_i1
338bp
uncharacterized_protein_LOC692458_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0042811 P pheromone biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3050 O_TrvaFAMAMG1464_complete:A_TrvaFAMAMG_TR2292c0_g2_i1
429bp
putative_G_protein-coupled_receptor_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0009881 F photoreceptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0018298 P protein-chromophore linkage
GO:0050896 P response to stimulus
3051 O_TrvaFAMAMG14650_5prime_partial:A_TrvaFAMAMG_TR11792c0_g1_i2
278bp
uncharacterized_protein_LOC692458_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0017105 F acyl-CoA delta11-desaturase activity
GO:0042811 P pheromone biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3052 O_TrvaFAMAMG14651_3prime_partial:A_TrvaFAMAMG_TR11793c0_g1_i1
776bp
PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
3053 O_TrvaFAMAMG14656_3prime_partial:A_TrvaFAMAMG_TR11793c0_g1_i2
776bp
PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
3054 O_TrvaFAMAMG14661_3prime_partial:A_TrvaFAMAMG_TR11793c0_g1_i3
776bp
PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
3055 O_TrvaFAMAMG14666_3prime_partial:A_TrvaFAMAMG_TR11793c0_g1_i4
1191bp
PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007596 P blood coagulation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0046872 F metal ion binding
GO:0046966 F thyroid hormone receptor binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
3056 O_TrvaFAMAMG1466_complete:A_TrvaFAMAMG_TR2293c1_g1_i1
449bp
PREDICTED:_NEDD8-activating_enzyme_E1_catalytic_subunit_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0019781 F NEDD8 activating enzyme activity
GO:0045116 P protein neddylation
3057 O_TrvaFAMAMG14671_3prime_partial:A_TrvaFAMAMG_TR11794c0_g3_i1
491bp
PREDICTED:_uncharacterized_protein_LOC101744153_[Bombyx_mori]
3058 O_TrvaFAMAMG14673_internal:A_TrvaFAMAMG_TR11794c0_g4_i1
100bp
Farnesyl_pyrophosphate_synthase_1_[Papilio_xuthus]
3059 O_TrvaFAMAMG14675_5prime_partial:A_TrvaFAMAMG_TR11794c0_g5_i1
303bp
PREDICTED:_uncharacterized_protein_LOC101744153_[Bombyx_mori]
3060 O_TrvaFAMAMG14676_3prime_partial:A_TrvaFAMAMG_TR11795c0_g1_i1
282bp
PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
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