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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2701 O_TrvaFAMAMG14131_complete:A_TrvaFAMAMG_TR11413c0_g3_i5
306bp
PREDICTED:_uncharacterized_protein_LOC101735983_[Bombyx_mori]
2702 O_TrvaFAMAMG14132_complete:A_TrvaFAMAMG_TR11414c0_g1_i1
1389bp
PREDICTED:_LOW_QUALITY_PROTEIN:_extracellular_sulfatase_SULF-1_homolog_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0007389 P pattern specification process
GO:0008045 P motor neuron axon guidance
GO:0008152 P metabolic process
GO:0008449 F N-acetylglucosamine-6-sulfatase activity
GO:0008484 F sulfuric ester hydrolase activity
GO:0009986 C cell surface
GO:0016201 P synaptic target inhibition
GO:0016787 F hydrolase activity
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030202 P heparin metabolic process
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
2703 O_TrvaFAMAMG14133_5prime_partial:A_TrvaFAMAMG_TR11414c0_g1_i2
928bp
PREDICTED:_LOW_QUALITY_PROTEIN:_extracellular_sulfatase_SULF-1_homolog_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0007389 P pattern specification process
GO:0008045 P motor neuron axon guidance
GO:0008152 P metabolic process
GO:0008449 F N-acetylglucosamine-6-sulfatase activity
GO:0008484 F sulfuric ester hydrolase activity
GO:0009986 C cell surface
GO:0016201 P synaptic target inhibition
GO:0016787 F hydrolase activity
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0030202 P heparin metabolic process
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
2704 O_TrvaFAMAMG14135_internal:A_TrvaFAMAMG_TR11415c0_g3_i1
111bp
2705 O_TrvaFAMAMG14137_complete:A_TrvaFAMAMG_TR11416c0_g1_i1
253bp
hypothetical_protein_KGM_19145_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0010629 P negative regulation of gene expression
GO:0016246 P RNA interference
GO:0035925 F mRNA 3'-UTR AU-rich region binding
GO:0046872 F metal ion binding
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
2706 O_TrvaFAMAMG14138_complete:A_TrvaFAMAMG_TR11417c0_g1_i1
440bp
PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2707 O_TrvaFAMAMG14139_complete:A_TrvaFAMAMG_TR11417c0_g1_i2
542bp
PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2708 O_TrvaFAMAMG1413_complete:A_TrvaFAMAMG_TR2281c1_g1_i2
546bp
PREDICTED:_four_and_a_half_LIM_domains_protein_2_isoform_X2_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
2709 O_TrvaFAMAMG14140_complete:A_TrvaFAMAMG_TR11417c0_g1_i3
509bp
PREDICTED:_zinc_finger_protein_665_isoform_X2_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2710 O_TrvaFAMAMG14141_complete:A_TrvaFAMAMG_TR11418c0_g2_i1
259bp
PREDICTED:_NADH_dehydrogenase_(ubiquinone)_complex_I,_assembly_factor_6_isoform_X2_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
2711 O_TrvaFAMAMG14142_5prime_partial:A_TrvaFAMAMG_TR11418c0_g2_i2
295bp
PREDICTED:_NADH_dehydrogenase_(ubiquinone)_complex_I,_assembly_factor_6_isoform_X1_[Papilio_polytes]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
2712 O_TrvaFAMAMG14143_complete:A_TrvaFAMAMG_TR11419c0_g2_i1
479bp
PREDICTED:_MFS-type_transporter_SLC18B1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2713 O_TrvaFAMAMG14144_complete:A_TrvaFAMAMG_TR11419c0_g2_i1
299bp
PREDICTED:_MFS-type_transporter_SLC18B1-like_[Bombyx_mori]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2714 O_TrvaFAMAMG14146_complete:A_TrvaFAMAMG_TR11419c0_g2_i2
479bp
PREDICTED:_MFS-type_transporter_SLC18B1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2715 O_TrvaFAMAMG14147_complete:A_TrvaFAMAMG_TR11419c0_g2_i3
479bp
PREDICTED:_MFS-type_transporter_SLC18B1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2716 O_TrvaFAMAMG14148_complete:A_TrvaFAMAMG_TR11419c0_g2_i3
197bp
PREDICTED:_MFS-type_transporter_SLC18B1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2717 O_TrvaFAMAMG14150_complete:A_TrvaFAMAMG_TR11419c0_g2_i4
479bp
PREDICTED:_MFS-type_transporter_SLC18B1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2718 O_TrvaFAMAMG14153_complete:A_TrvaFAMAMG_TR11423c0_g1_i1
325bp
PREDICTED:_glyoxylate_reductase/hydroxypyruvate_reductase-like_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
2719 O_TrvaFAMAMG14154_complete:A_TrvaFAMAMG_TR11424c0_g1_i1
1757bp
hypothetical_protein_KGM_17418_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0044212 F transcription cis-regulatory region binding
2720 O_TrvaFAMAMG14162_internal:A_TrvaFAMAMG_TR11426c0_g3_i1
107bp
PREDICTED:_uncharacterized_protein_LOC101735921_[Bombyx_mori]
2721 O_TrvaFAMAMG14166_complete:A_TrvaFAMAMG_TR11427c0_g2_i1
391bp
PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048365 F small GTPase binding
GO:0048813 P dendrite morphogenesis
2722 O_TrvaFAMAMG14167_complete:A_TrvaFAMAMG_TR11427c0_g2_i2
1150bp
PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048365 F small GTPase binding
GO:0048813 P dendrite morphogenesis
2723 O_TrvaFAMAMG14170_internal:A_TrvaFAMAMG_TR11428c0_g1_i1
413bp
PREDICTED:_uncharacterized_protein_LOC101740626_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0005216 F ion channel activity
GO:0005221 F intracellular cyclic nucleotide activated cation channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005223 F intracellular cGMP-activated cation channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030553 F cGMP binding
GO:0042391 P regulation of membrane potential
GO:0046549 P retinal cone cell development
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902495 C transmembrane transporter complex
2724 O_TrvaFAMAMG14171_internal:A_TrvaFAMAMG_TR11428c0_g2_i1
628bp
PREDICTED:_uncharacterized_protein_LOC101740626_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0005216 F ion channel activity
GO:0005221 F intracellular cyclic nucleotide activated cation channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005223 F intracellular cGMP-activated cation channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030553 F cGMP binding
GO:0042391 P regulation of membrane potential
GO:0046549 P retinal cone cell development
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902495 C transmembrane transporter complex
2725 O_TrvaFAMAMG14172_5prime_partial:A_TrvaFAMAMG_TR11428c1_g1_i1
1052bp
PREDICTED:_uncharacterized_protein_LOC101740626_[Bombyx_mori]
2726 O_TrvaFAMAMG14174_complete:A_TrvaFAMAMG_TR11428c1_g1_i1
101bp
2727 O_TrvaFAMAMG14175_5prime_partial:A_TrvaFAMAMG_TR11428c1_g1_i2
1046bp
PREDICTED:_uncharacterized_protein_LOC101740626_[Bombyx_mori]
2728 O_TrvaFAMAMG14177_complete:A_TrvaFAMAMG_TR11428c1_g1_i2
101bp
2729 O_TrvaFAMAMG14178_internal:A_TrvaFAMAMG_TR11428c1_g2_i1
153bp
PREDICTED:_uncharacterized_protein_LOC101740626_[Bombyx_mori]
2730 O_TrvaFAMAMG14179_complete:A_TrvaFAMAMG_TR11429c0_g1_i1
481bp
PREDICTED:_peptidylprolyl_isomerase_domain_and_WD_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0008380 P RNA splicing
GO:0016853 F isomerase activity
GO:0071013 C catalytic step 2 spliceosome
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