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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2641 O_TrvaFAMAMG14031_complete:A_TrvaFAMAMG_TR11392c0_g1_i2
169bp
PREDICTED:_putative_uncharacterized_protein_DDB_G0291608_isoform_X3_[Bombyx_mori]
2642 O_TrvaFAMAMG14035_internal:A_TrvaFAMAMG_TR11393c0_g1_i1
128bp
PREDICTED:_uncharacterized_protein_LOC105383993_[Plutella_xylostella]
2643 O_TrvaFAMAMG14037_internal:A_TrvaFAMAMG_TR11393c2_g1_i1
155bp
non-LTR_retrotransposon_R1Bmks_ORF1_protein_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2644 O_TrvaFAMAMG14038_complete:A_TrvaFAMAMG_TR11394c0_g1_i1
1475bp
PREDICTED:_WD_repeat-containing_protein_7_isoform_X2_[Papilio_xuthus]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
2645 O_TrvaFAMAMG14040_complete:A_TrvaFAMAMG_TR11394c0_g1_i2
1170bp
PREDICTED:_WD_repeat-containing_protein_7_isoform_X2_[Papilio_xuthus]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
2646 O_TrvaFAMAMG14041_complete:A_TrvaFAMAMG_TR11395c0_g1_i1
485bp
PREDICTED:_ATP-sensitive_inward_rectifier_potassium_channel_11-like_[Papilio_xuthus]
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0008076 C voltage-gated potassium channel complex
GO:0010107 P potassium ion import across plasma membrane
GO:0014861 P regulation of skeletal muscle contraction via regulation of action potential
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031224 C intrinsic component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042802 F identical protein binding
GO:0051289 P protein homotetramerization
GO:0055119 P relaxation of cardiac muscle
GO:0060306 P regulation of membrane repolarization
GO:0071805 P potassium ion transmembrane transport
GO:0086001 P cardiac muscle cell action potential
GO:0086002 P cardiac muscle cell action potential involved in contraction
GO:0086008 F voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization
GO:0086011 P membrane repolarization during action potential
GO:0086013 P membrane repolarization during cardiac muscle cell action potential
GO:0086091 P regulation of heart rate by cardiac conduction
GO:0090076 P relaxation of skeletal muscle
2647 O_TrvaFAMAMG14043_complete:A_TrvaFAMAMG_TR11397c0_g1_i1
883bp
PREDICTED:_hemicentin-1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031253 C cell projection membrane
GO:0043198 C dendritic shaft
GO:0045121 C membrane raft
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
2648 O_TrvaFAMAMG14045_complete:A_TrvaFAMAMG_TR11397c0_g1_i2
642bp
PREDICTED:_hemicentin-1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031253 C cell projection membrane
GO:0043198 C dendritic shaft
GO:0045121 C membrane raft
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
2649 O_TrvaFAMAMG14047_complete:A_TrvaFAMAMG_TR11397c0_g1_i3
877bp
PREDICTED:_hemicentin-1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031253 C cell projection membrane
GO:0043198 C dendritic shaft
GO:0045121 C membrane raft
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
2650 O_TrvaFAMAMG14049_complete:A_TrvaFAMAMG_TR11397c0_g1_i4
648bp
PREDICTED:_hemicentin-1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031253 C cell projection membrane
GO:0043198 C dendritic shaft
GO:0045121 C membrane raft
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
2651 O_TrvaFAMAMG1404_3prime_partial:A_TrvaFAMAMG_TR2281c0_g2_i2
250bp
PREDICTED:_uncharacterized_protein_LOC106125285_isoform_X2_[Papilio_xuthus]
2652 O_TrvaFAMAMG14051_5prime_partial:A_TrvaFAMAMG_TR11397c0_g2_i1
202bp
PREDICTED:_hemicentin-1_[Bombyx_mori]
2653 O_TrvaFAMAMG14052_complete:A_TrvaFAMAMG_TR11398c0_g1_i1
1813bp
PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
2654 O_TrvaFAMAMG14056_complete:A_TrvaFAMAMG_TR11398c0_g2_i1
1808bp
PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
2655 O_TrvaFAMAMG14060_5prime_partial:A_TrvaFAMAMG_TR11399c0_g1_i1
328bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
GO:0001878 P response to yeast
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2656 O_TrvaFAMAMG14061_complete:A_TrvaFAMAMG_TR11399c0_g1_i2
352bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
GO:0001878 P response to yeast
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2657 O_TrvaFAMAMG14063_internal:A_TrvaFAMAMG_TR11400c0_g1_i1
118bp
PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_1_[Plutella_xylostella]
2658 O_TrvaFAMAMG14064_5prime_partial:A_TrvaFAMAMG_TR11400c1_g1_i1
706bp
PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_2_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0019903 F protein phosphatase binding
GO:0043666 P regulation of phosphoprotein phosphatase activity
GO:0048208 P COPII vesicle coating
2659 O_TrvaFAMAMG14066_5prime_partial:A_TrvaFAMAMG_TR11401c0_g1_i1
152bp
PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
2660 O_TrvaFAMAMG14067_internal:A_TrvaFAMAMG_TR11401c1_g1_i2
443bp
PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0017053 C transcription repressor complex
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
2661 O_TrvaFAMAMG14068_complete:A_TrvaFAMAMG_TR11402c0_g1_i1
352bp
Uncharacterized_protein_OBRU01_18505_[Operophtera_brumata]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2662 O_TrvaFAMAMG14069_5prime_partial:A_TrvaFAMAMG_TR11402c0_g1_i1
334bp
PREDICTED:_RB-associated_KRAB_zinc_finger_protein_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2663 O_TrvaFAMAMG1406_complete:A_TrvaFAMAMG_TR2281c0_g1_i2
341bp
PREDICTED:_uncharacterized_protein_LOC106143533_[Amyelois_transitella]
2664 O_TrvaFAMAMG14070_3prime_partial:A_TrvaFAMAMG_TR11402c0_g2_i1
302bp
Uncharacterized_protein_OBRU01_01168_[Operophtera_brumata]
2665 O_TrvaFAMAMG14072_complete:A_TrvaFAMAMG_TR11403c0_g1_i1
248bp
PREDICTED:_arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
2666 O_TrvaFAMAMG14074_complete:A_TrvaFAMAMG_TR11403c0_g1_i2
248bp
PREDICTED:_arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
2667 O_TrvaFAMAMG14076_complete:A_TrvaFAMAMG_TR11403c0_g1_i3
248bp
PREDICTED:_arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
2668 O_TrvaFAMAMG14078_complete:A_TrvaFAMAMG_TR11403c0_g1_i4
248bp
PREDICTED:_arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
2669 O_TrvaFAMAMG14081_complete:A_TrvaFAMAMG_TR11403c0_g3_i1
248bp
PREDICTED:_arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
2670 O_TrvaFAMAMG14083_3prime_partial:A_TrvaFAMAMG_TR11405c0_g1_i1
184bp
PREDICTED:_uncharacterized_protein_LOC106137432_[Amyelois_transitella]
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