SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/26102
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12541 O_TrvaFAMAMG29049_complete:A_TrvaFAMAMG_TR23536c1_g1_i5
201bp
PREDICTED:_kazrin_isoform_X5_[Bombyx_mori]
12542 O_TrvaFAMAMG2904_5prime_partial:A_TrvaFAMAMG_TR3890c0_g1_i2
1750bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0044822 F RNA binding
GO:0045087 P innate immune response
12543 O_TrvaFAMAMG29053_internal:A_TrvaFAMAMG_TR23536c1_g1_i6
293bp
PREDICTED:_kazrin_isoform_X5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0031424 P keratinization
12544 O_TrvaFAMAMG29054_internal:A_TrvaFAMAMG_TR23536c1_g1_i7
423bp
PREDICTED:_kazrin_isoform_X5_[Bombyx_mori]
GO:0001533 C cornified envelope
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0030057 C desmosome
GO:0031424 P keratinization
12545 O_TrvaFAMAMG29056_complete:A_TrvaFAMAMG_TR23536c1_g1_i8
873bp
PREDICTED:_kazrin_isoform_X7_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0031424 P keratinization
12546 O_TrvaFAMAMG29057_complete:A_TrvaFAMAMG_TR23536c1_g1_i8
201bp
PREDICTED:_kazrin_isoform_X5_[Bombyx_mori]
12547 O_TrvaFAMAMG29061_complete:A_TrvaFAMAMG_TR23536c1_g1_i9
880bp
PREDICTED:_kazrin_isoform_X6_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0031424 P keratinization
12548 O_TrvaFAMAMG29062_complete:A_TrvaFAMAMG_TR23536c1_g1_i9
201bp
PREDICTED:_kazrin_isoform_X5_[Bombyx_mori]
12549 O_TrvaFAMAMG29066_internal:A_TrvaFAMAMG_TR23536c1_g1_i10
658bp
PREDICTED:_kazrin_isoform_X2_[Bombyx_mori]
GO:0001533 C cornified envelope
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0030057 C desmosome
GO:0031424 P keratinization
12550 O_TrvaFAMAMG29068_complete:A_TrvaFAMAMG_TR23536c1_g1_i11
848bp
PREDICTED:_kazrin_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0031424 P keratinization
12551 O_TrvaFAMAMG29069_complete:A_TrvaFAMAMG_TR23536c1_g1_i11
201bp
PREDICTED:_kazrin_isoform_X5_[Bombyx_mori]
12552 O_TrvaFAMAMG29073_complete:A_TrvaFAMAMG_TR23537c3_g2_i1
204bp
PREDICTED:_dnaJ_(Hsp40)_homolog_7_isoform_X1_[Bombyx_mori]
GO:0001964 P startle response
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006457 P protein folding
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016191 P synaptic vesicle uncoating
GO:0016192 P vesicle-mediated transport
GO:0031987 P locomotion involved in locomotory behavior
GO:0043195 C terminal bouton
GO:0048854 P brain morphogenesis
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0070050 P neuron cellular homeostasis
GO:1900073 P regulation of neuromuscular synaptic transmission
GO:1903035 P negative regulation of response to wounding
12553 O_TrvaFAMAMG29074_complete:A_TrvaFAMAMG_TR23537c3_g2_i2
203bp
DnaJ_(Hsp40)_homolog_7_[Bombyx_mori]
GO:0001964 P startle response
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006457 P protein folding
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016191 P synaptic vesicle uncoating
GO:0016192 P vesicle-mediated transport
GO:0031987 P locomotion involved in locomotory behavior
GO:0043195 C terminal bouton
GO:0048854 P brain morphogenesis
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0070050 P neuron cellular homeostasis
GO:1900073 P regulation of neuromuscular synaptic transmission
GO:1903035 P negative regulation of response to wounding
12554 O_TrvaFAMAMG29075_3prime_partial:A_TrvaFAMAMG_TR23537c4_g2_i1
333bp
hypothetical_protein_KGM_05133_[Danaus_plexippus]
12555 O_TrvaFAMAMG29076_complete:A_TrvaFAMAMG_TR23537c6_g1_i1
266bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12556 O_TrvaFAMAMG29077_complete:A_TrvaFAMAMG_TR23537c6_g1_i3
219bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12557 O_TrvaFAMAMG29078_5prime_partial:A_TrvaFAMAMG_TR23537c6_g1_i3
214bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008150 P biological_process
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12558 O_TrvaFAMAMG29079_complete:A_TrvaFAMAMG_TR23537c6_g1_i4
289bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12559 O_TrvaFAMAMG29080_complete:A_TrvaFAMAMG_TR23537c6_g1_i4
232bp
putative_ezrin-binding_protein_pace-1_[Danaus_plexippus]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008150 P biological_process
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12560 O_TrvaFAMAMG29081_complete:A_TrvaFAMAMG_TR23537c6_g1_i5
266bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12561 O_TrvaFAMAMG29082_complete:A_TrvaFAMAMG_TR23537c6_g1_i5
232bp
putative_ezrin-binding_protein_pace-1_[Danaus_plexippus]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008150 P biological_process
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12562 O_TrvaFAMAMG29084_5prime_partial:A_TrvaFAMAMG_TR23537c6_g1_i6
438bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12563 O_TrvaFAMAMG29085_complete:A_TrvaFAMAMG_TR23537c6_g1_i7
414bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12564 O_TrvaFAMAMG29086_complete:A_TrvaFAMAMG_TR23537c6_g1_i7
232bp
putative_ezrin-binding_protein_pace-1_[Danaus_plexippus]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008150 P biological_process
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12565 O_TrvaFAMAMG29087_complete:A_TrvaFAMAMG_TR23537c6_g1_i8
414bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12566 O_TrvaFAMAMG29088_complete:A_TrvaFAMAMG_TR23537c6_g1_i8
232bp
putative_ezrin-binding_protein_pace-1_[Danaus_plexippus]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008150 P biological_process
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12567 O_TrvaFAMAMG29089_5prime_partial:A_TrvaFAMAMG_TR23537c6_g1_i10
335bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12568 O_TrvaFAMAMG29090_complete:A_TrvaFAMAMG_TR23537c6_g1_i11
266bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
12569 O_TrvaFAMAMG29092_internal:A_TrvaFAMAMG_TR23538c0_g1_i1
375bp
PREDICTED:_uncharacterized_protein_LOC106719734_[Papilio_machaon]
12570 O_TrvaFAMAMG29093_5prime_partial:A_TrvaFAMAMG_TR23538c1_g1_i1
1054bp
PREDICTED:_uncharacterized_protein_LOC106129228_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
previous next from show/26102

- SilkBase 1999-2023 -