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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11821 O_TrvaFAMAMG27826_5prime_partial:A_TrvaFAMAMG_TR23456c2_g1_i3
1107bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X2_[Bombyx_mori]
11822 O_TrvaFAMAMG27829_complete:A_TrvaFAMAMG_TR23456c2_g1_i4
100bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X3_[Bombyx_mori]
11823 O_TrvaFAMAMG2782_5prime_partial:A_TrvaFAMAMG_TR3772c0_g1_i1
310bp
PREDICTED:_iodotyrosine_deiodinase_1_[Papilio_machaon]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
11824 O_TrvaFAMAMG27830_5prime_partial:A_TrvaFAMAMG_TR23456c2_g1_i5
931bp
PREDICTED:_uncharacterized_protein_LOC106142856_isoform_X1_[Amyelois_transitella]
11825 O_TrvaFAMAMG27832_complete:A_TrvaFAMAMG_TR23456c2_g1_i5
100bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X3_[Bombyx_mori]
11826 O_TrvaFAMAMG27834_complete:A_TrvaFAMAMG_TR23456c2_g1_i6
100bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X3_[Bombyx_mori]
11827 O_TrvaFAMAMG27836_complete:A_TrvaFAMAMG_TR23456c2_g1_i7
1041bp
PREDICTED:_uncharacterized_protein_LOC106142856_isoform_X1_[Amyelois_transitella]
11828 O_TrvaFAMAMG27839_complete:A_TrvaFAMAMG_TR23456c2_g1_i7
100bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X3_[Bombyx_mori]
11829 O_TrvaFAMAMG2783_5prime_partial:A_TrvaFAMAMG_TR3773c0_g1_i1
192bp
PREDICTED:_28S_ribosomal_protein_S18a,_mitochondrial_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
11830 O_TrvaFAMAMG27840_complete:A_TrvaFAMAMG_TR23456c2_g1_i8
194bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X2_[Bombyx_mori]
11831 O_TrvaFAMAMG27842_complete:A_TrvaFAMAMG_TR23456c2_g1_i9
194bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X2_[Bombyx_mori]
11832 O_TrvaFAMAMG27845_complete:A_TrvaFAMAMG_TR23456c2_g1_i10
123bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X2_[Bombyx_mori]
11833 O_TrvaFAMAMG27846_complete:A_TrvaFAMAMG_TR23456c2_g1_i10
100bp
PREDICTED:_uncharacterized_protein_LOC101744958_isoform_X3_[Bombyx_mori]
11834 O_TrvaFAMAMG27847_complete:A_TrvaFAMAMG_TR23457c0_g1_i2
423bp
PREDICTED:_uncharacterized_protein_LOC106129367_isoform_X3_[Amyelois_transitella]
GO:0001510 P RNA methylation
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0008171 F O-methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0032259 P methylation
GO:0034587 P piRNA metabolic process
GO:0035194 P post-transcriptional gene silencing by RNA
GO:0046872 F metal ion binding
11835 O_TrvaFAMAMG27849_complete:A_TrvaFAMAMG_TR23457c0_g1_i2
109bp
PREDICTED:_small_RNA_2'-O-methyltransferase_[Bombyx_mori]
11836 O_TrvaFAMAMG2784_complete:A_TrvaFAMAMG_TR3775c0_g1_i1
950bp
PREDICTED:_calsyntenin-1_[Papilio_xuthus]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045211 C postsynaptic membrane
11837 O_TrvaFAMAMG27851_complete:A_TrvaFAMAMG_TR23458c0_g2_i1
567bp
PREDICTED:_zinc-responsive_transcriptional_regulator_ZAP1-like_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11838 O_TrvaFAMAMG27859_complete:A_TrvaFAMAMG_TR23460c2_g1_i1
249bp
PREDICTED:_uncharacterized_protein_LOC105384098_[Plutella_xylostella]
11839 O_TrvaFAMAMG27860_complete:A_TrvaFAMAMG_TR23460c2_g1_i2
302bp
PREDICTED:_uncharacterized_protein_LOC105384098_[Plutella_xylostella]
11840 O_TrvaFAMAMG27862_complete:A_TrvaFAMAMG_TR23460c3_g2_i4
979bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11841 O_TrvaFAMAMG27865_5prime_partial:A_TrvaFAMAMG_TR23461c5_g2_i1
129bp
PREDICTED:_uncharacterized_protein_LOC106665172_[Cimex_lectularius]
11842 O_TrvaFAMAMG27870_complete:A_TrvaFAMAMG_TR23462c0_g1_i1
1095bp
PREDICTED:_uncharacterized_protein_LOC105842505_[Bombyx_mori]
11843 O_TrvaFAMAMG27871_5prime_partial:A_TrvaFAMAMG_TR23463c0_g1_i1
669bp
PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
11844 O_TrvaFAMAMG27873_internal:A_TrvaFAMAMG_TR23463c0_g1_i2
1181bp
PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
11845 O_TrvaFAMAMG27875_3prime_partial:A_TrvaFAMAMG_TR23463c0_g1_i3
529bp
PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]
11846 O_TrvaFAMAMG27876_internal:A_TrvaFAMAMG_TR23463c0_g1_i4
338bp
PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]
11847 O_TrvaFAMAMG27879_complete:A_TrvaFAMAMG_TR23463c0_g2_i1
757bp
PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
11848 O_TrvaFAMAMG2787_complete:A_TrvaFAMAMG_TR3776c0_g1_i1
361bp
PREDICTED:_aldose_1-epimerase-like_[Plutella_xylostella]
GO:0003824 F catalytic activity
GO:0004034 F aldose 1-epimerase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0006012 P galactose metabolic process
GO:0016853 F isomerase activity
GO:0019318 P hexose metabolic process
GO:0030246 F carbohydrate binding
GO:0070062 C extracellular exosome
11849 O_TrvaFAMAMG27882_3prime_partial:A_TrvaFAMAMG_TR23465c0_g1_i1
378bp
hypothetical_protein_RR48_12405_[Papilio_machaon]
11850 O_TrvaFAMAMG27883_5prime_partial:A_TrvaFAMAMG_TR23465c1_g1_i1
1537bp
PREDICTED:_uncharacterized_protein_LOC106134691_[Amyelois_transitella]
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