Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
11671	O_TrvaFAMAMG27548_internal:A_TrvaFAMAMG_TR23443c1_g1_i1 105bp		hypothetical_protein_LOTGIDRAFT_123066,_partial_[Lottia_gigantea]
11672	O_TrvaFAMAMG2754_complete:A_TrvaFAMAMG_TR3700c0_g1_i1 160bp		hypothetical_protein_KGM_18689_[Danaus_plexippus]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000398 P mRNA splicing, via spliceosome GO:0003714 F transcription corepressor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006342 P heterochromatin assembly GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007275 P multicellular organism development GO:0008134 F transcription factor binding GO:0016580 C Sin3 complex GO:0045892 P negative regulation of transcription, DNA-templated GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome
11673	O_TrvaFAMAMG27551_internal:A_TrvaFAMAMG_TR23443c3_g1_i1 112bp		circumsporozoite,_partial_[Lasius_niger]
11674	O_TrvaFAMAMG27556_internal:A_TrvaFAMAMG_TR23443c3_g1_i3 147bp
11675	O_TrvaFAMAMG27559_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i1 119bp
11676	O_TrvaFAMAMG2755_complete:A_TrvaFAMAMG_TR3704c0_g1_i1 245bp		PREDICTED:_D-erythrulose_reductase-like_[Papilio_xuthus]	GO:0001669 C acrosomal vesicle GO:0005881 C cytoplasmic microtubule GO:0005975 P carbohydrate metabolic process GO:0005997 P xylulose metabolic process GO:0006006 P glucose metabolic process GO:0008152 P metabolic process GO:0016020 C membrane GO:0016491 F oxidoreductase activity GO:0031410 C cytoplasmic vesicle GO:0042732 P D-xylose metabolic process GO:0050038 F L-xylulose reductase (NADP+) activity GO:0051289 P protein homotetramerization GO:0055114 P obsolete oxidation-reduction process
11677	O_TrvaFAMAMG27561_complete:A_TrvaFAMAMG_TR23443c3_g3_i2 122bp		hypothetical_protein_RR46_13574_[Papilio_xuthus]
11678	O_TrvaFAMAMG27562_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i2 119bp
11679	O_TrvaFAMAMG27564_complete:A_TrvaFAMAMG_TR23443c3_g3_i3 122bp		hypothetical_protein_RR46_13574_[Papilio_xuthus]
11680	O_TrvaFAMAMG27565_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i3 119bp
11681	O_TrvaFAMAMG27567_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i4 119bp
11682	O_TrvaFAMAMG27569_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i5 119bp
11683	O_TrvaFAMAMG2756_internal:A_TrvaFAMAMG_TR3706c0_g1_i1 161bp		PREDICTED:_uncharacterized_protein_LOC106694177_[Microplitis_demolitor]
11684	O_TrvaFAMAMG27571_complete:A_TrvaFAMAMG_TR23443c3_g3_i6 122bp		hypothetical_protein_RR46_13574_[Papilio_xuthus]
11685	O_TrvaFAMAMG27572_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i6 119bp
11686	O_TrvaFAMAMG27574_complete:A_TrvaFAMAMG_TR23443c3_g3_i7 122bp		hypothetical_protein_RR46_13574_[Papilio_xuthus]
11687	O_TrvaFAMAMG27575_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i7 119bp
11688	O_TrvaFAMAMG27577_3prime_partial:A_TrvaFAMAMG_TR23443c3_g3_i8 119bp
11689	O_TrvaFAMAMG2758_complete:A_TrvaFAMAMG_TR3708c0_g1_i1 323bp		PREDICTED:_39S_ribosomal_protein_L44,_mitochondrial-like_[Bombyx_mori]	GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005840 C ribosome GO:0006396 P RNA processing GO:0016787 F hydrolase activity GO:0030422 P production of siRNA involved in RNA interference GO:0030529 C ribonucleoprotein complex GO:0031053 P primary miRNA processing GO:0031054 P pre-miRNA processing GO:0044822 F RNA binding GO:0070124 P mitochondrial translational initiation GO:0070125 P mitochondrial translational elongation GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
11690	O_TrvaFAMAMG27595_internal:A_TrvaFAMAMG_TR23444c0_g1_i1 202bp		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]	GO:0004842 F ubiquitin-protein transferase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005743 C mitochondrial inner membrane GO:0005814 C centriole GO:0005856 C cytoskeleton GO:0006281 P DNA repair GO:0006303 P double-strand break repair via nonhomologous end joining GO:0006886 P intracellular protein transport GO:0006974 P cellular response to DNA damage stimulus GO:0007283 P spermatogenesis GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0016925 P protein sumoylation GO:0031625 F ubiquitin protein ligase binding GO:0032183 F SUMO binding GO:0042787 P ubiquitin-dependent protein catabolic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding
11691	O_TrvaFAMAMG27596_5prime_partial:A_TrvaFAMAMG_TR23444c0_g2_i1 3771bp		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]	GO:0004842 F ubiquitin-protein transferase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005575 C cellular_component GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005814 C centriole GO:0005856 C cytoskeleton GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0042787 P ubiquitin-dependent protein catabolic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding
11692	O_TrvaFAMAMG2759_internal:A_TrvaFAMAMG_TR3715c0_g1_i1 158bp		PREDICTED:_alpha-amylase-like_[Amyelois_transitella]	GO:0003824 F catalytic activity GO:0004556 F alpha-amylase activity GO:0005576 C extracellular region GO:0005975 P carbohydrate metabolic process GO:0007586 P digestion GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0016798 F hydrolase activity, acting on glycosyl bonds GO:0043169 F cation binding GO:0046872 F metal ion binding
11693	O_TrvaFAMAMG275_5prime_partial:A_TrvaFAMAMG_TR540c0_g3_i1 355bp		PREDICTED:_annexin_IX_isoform_X1_[Bombyx_mori]	GO:0003779 F actin binding GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005543 F phospholipid binding GO:0005544 F calcium-dependent phospholipid binding GO:0005938 C cell cortex GO:0010797 P regulation of multivesicular body size involved in endosome transport GO:0012505 C endomembrane system GO:0030011 P maintenance of cell polarity GO:0030507 F spectrin binding GO:0032509 P endosome transport via multivesicular body sorting pathway GO:0048190 P wing disc dorsal/ventral pattern formation GO:0061467 P protein localization to basolateral plasma membrane
11694	O_TrvaFAMAMG27600_complete:A_TrvaFAMAMG_TR23446c1_g1_i2 110bp
11695	O_TrvaFAMAMG27601_complete:A_TrvaFAMAMG_TR23446c1_g1_i4 115bp
11696	O_TrvaFAMAMG27602_5prime_partial:A_TrvaFAMAMG_TR23446c2_g1_i1 1771bp		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_FAM135A_[Bombyx_mori]
11697	O_TrvaFAMAMG27603_5prime_partial:A_TrvaFAMAMG_TR23446c2_g1_i3 1769bp		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_FAM135A_[Bombyx_mori]
11698	O_TrvaFAMAMG27604_complete:A_TrvaFAMAMG_TR23446c2_g2_i2 427bp		PREDICTED:_peptidyl-alpha-hydroxyglycine_alpha-amidating_lyase_1_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004598 F peptidylamidoglycolate lyase activity GO:0005886 C plasma membrane GO:0006518 P peptide metabolic process GO:0007619 P courtship behavior GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016829 F lyase activity GO:0043025 C neuronal cell body GO:0044719 P regulation of imaginal disc-derived wing size GO:0046872 F metal ion binding
11699	O_TrvaFAMAMG27605_complete:A_TrvaFAMAMG_TR23446c2_g4_i1 346bp		PREDICTED:_uncharacterized_protein_LOC106124430_[Papilio_xuthus]	GO:0000398 P mRNA splicing, via spliceosome GO:0003677 F DNA binding GO:0003697 F single-stranded DNA binding GO:0003727 F single-stranded RNA binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005703 C polytene chromosome puff GO:0005875 C microtubule associated complex GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding GO:0048024 P regulation of mRNA splicing, via spliceosome GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome
11700	O_TrvaFAMAMG27609_complete:A_TrvaFAMAMG_TR23446c2_g4_i2 346bp		PREDICTED:_uncharacterized_protein_LOC106124430_[Papilio_xuthus]	GO:0000398 P mRNA splicing, via spliceosome GO:0003677 F DNA binding GO:0003697 F single-stranded DNA binding GO:0003727 F single-stranded RNA binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005703 C polytene chromosome puff GO:0005875 C microtubule associated complex GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding GO:0048024 P regulation of mRNA splicing, via spliceosome GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome