SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/15068
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3391 O_ErmoMG15268_complete:A_ErmoMG_comp37010_c1_seq2
361bp
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
3392 O_ErmoMG1526_internal:A_ErmoMG_comp19902_c0_seq1
660bp
PREDICTED:_uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
3393 O_ErmoMG15270_complete:A_ErmoMG_comp37011_c0_seq1
766bp
GO:0000255 P allantoin metabolic process
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001553 P luteinization
GO:0001666 P response to hypoxia
GO:0001779 P natural killer cell differentiation
GO:0001889 P liver development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006101 P citrate metabolic process
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006105 P succinate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006549 P isoleucine metabolic process
GO:0006573 P valine metabolic process
GO:0006600 P creatine metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006953 P acute-phase response
GO:0007165 P signal transduction
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007548 P sex differentiation
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008284 P positive regulation of cell population proliferation
GO:0019218 P regulation of steroid metabolic process
GO:0019221 P cytokine-mediated signaling pathway
GO:0019530 P taurine metabolic process
GO:0019903 F protein phosphatase binding
GO:0019915 P lipid storage
GO:0030155 P regulation of cell adhesion
GO:0030856 P regulation of epithelial cell differentiation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0032819 P positive regulation of natural killer cell proliferation
GO:0032825 P positive regulation of natural killer cell differentiation
GO:0032870 P cellular response to hormone stimulus
GO:0033077 P T cell differentiation in thymus
GO:0035259 F glucocorticoid receptor binding
GO:0038161 P prolactin signaling pathway
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042104 P positive regulation of activated T cell proliferation
GO:0042448 P progesterone metabolic process
GO:0043029 P T cell homeostasis
GO:0043066 P negative regulation of apoptotic process
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0045086 P positive regulation of interleukin-2 production
GO:0045471 P response to ethanol
GO:0045579 P positive regulation of B cell differentiation
GO:0045588 P positive regulation of gamma-delta T cell differentiation
GO:0045621 P positive regulation of lymphocyte differentiation
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0046449 P creatinine metabolic process
GO:0046543 P development of secondary female sexual characteristics
GO:0046544 P development of secondary male sexual characteristics
GO:0046983 F protein dimerization activity
GO:0048541 P Peyer's patch development
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0050729 P positive regulation of inflammatory response
GO:0051272 P positive regulation of cellular component movement
GO:0060397 P growth hormone receptor signaling pathway via JAK-STAT
GO:0070669 P response to interleukin-2
GO:0070670 P response to interleukin-4
GO:0070672 P response to interleukin-15
GO:0071363 P cellular response to growth factor stimulus
GO:0071364 P cellular response to epidermal growth factor stimulus
GO:0097531 P mast cell migration
3394 O_ErmoMG15271_complete:A_ErmoMG_comp37011_c0_seq3
766bp
GO:0000255 P allantoin metabolic process
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001553 P luteinization
GO:0001666 P response to hypoxia
GO:0001779 P natural killer cell differentiation
GO:0001889 P liver development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006101 P citrate metabolic process
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006105 P succinate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006549 P isoleucine metabolic process
GO:0006573 P valine metabolic process
GO:0006600 P creatine metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006953 P acute-phase response
GO:0007165 P signal transduction
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007548 P sex differentiation
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008284 P positive regulation of cell population proliferation
GO:0019218 P regulation of steroid metabolic process
GO:0019221 P cytokine-mediated signaling pathway
GO:0019530 P taurine metabolic process
GO:0019903 F protein phosphatase binding
GO:0019915 P lipid storage
GO:0030155 P regulation of cell adhesion
GO:0030856 P regulation of epithelial cell differentiation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0032819 P positive regulation of natural killer cell proliferation
GO:0032825 P positive regulation of natural killer cell differentiation
GO:0032870 P cellular response to hormone stimulus
GO:0033077 P T cell differentiation in thymus
GO:0035259 F glucocorticoid receptor binding
GO:0038161 P prolactin signaling pathway
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042104 P positive regulation of activated T cell proliferation
GO:0042448 P progesterone metabolic process
GO:0043029 P T cell homeostasis
GO:0043066 P negative regulation of apoptotic process
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0045086 P positive regulation of interleukin-2 production
GO:0045471 P response to ethanol
GO:0045579 P positive regulation of B cell differentiation
GO:0045588 P positive regulation of gamma-delta T cell differentiation
GO:0045621 P positive regulation of lymphocyte differentiation
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0046449 P creatinine metabolic process
GO:0046543 P development of secondary female sexual characteristics
GO:0046544 P development of secondary male sexual characteristics
GO:0046983 F protein dimerization activity
GO:0048541 P Peyer's patch development
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0050729 P positive regulation of inflammatory response
GO:0051272 P positive regulation of cellular component movement
GO:0060397 P growth hormone receptor signaling pathway via JAK-STAT
GO:0070669 P response to interleukin-2
GO:0070670 P response to interleukin-4
GO:0070672 P response to interleukin-15
GO:0071363 P cellular response to growth factor stimulus
GO:0071364 P cellular response to epidermal growth factor stimulus
GO:0097531 P mast cell migration
3395 O_ErmoMG15272_complete:A_ErmoMG_comp37012_c0_seq2
621bp
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3396 O_ErmoMG15273_complete:A_ErmoMG_comp37012_c0_seq3
323bp
3397 O_ErmoMG15274_complete:A_ErmoMG_comp37014_c0_seq1
235bp
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
3398 O_ErmoMG15275_3prime_partial:A_ErmoMG_comp37014_c0_seq2
312bp
GO:0002071 P glandular epithelial cell maturation
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0006641 P triglyceride metabolic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0007595 P lactation
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0030879 P mammary gland development
GO:0040014 P regulation of multicellular organism growth
GO:0046339 P diacylglycerol metabolic process
3399 O_ErmoMG15277_complete:A_ErmoMG_comp37014_c0_seq3
559bp
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
3400 O_ErmoMG15278_complete:A_ErmoMG_comp37014_c0_seq4
480bp
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
3401 O_ErmoMG15279_3prime_partial:A_ErmoMG_comp37014_c0_seq5
391bp
GO:0002071 P glandular epithelial cell maturation
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0006641 P triglyceride metabolic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0007595 P lactation
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030879 P mammary gland development
GO:0040014 P regulation of multicellular organism growth
GO:0046339 P diacylglycerol metabolic process
3402 O_ErmoMG15280_internal:A_ErmoMG_comp37015_c0_seq1
361bp
3403 O_ErmoMG15282_5prime_partial:A_ErmoMG_comp37017_c0_seq1
422bp
3404 O_ErmoMG15283_complete:A_ErmoMG_comp37018_c0_seq1
441bp
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016491 F oxidoreductase activity
GO:0048038 F quinone binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070221 P sulfide oxidation, using sulfide:quinone oxidoreductase
GO:0070224 F sulfide:quinone oxidoreductase activity
GO:0070813 P hydrogen sulfide metabolic process
3405 O_ErmoMG15284_complete:A_ErmoMG_comp37019_c0_seq1
515bp
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0070125 P mitochondrial translational elongation
3406 O_ErmoMG15285_complete:A_ErmoMG_comp37019_c0_seq1
256bp
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0070125 P mitochondrial translational elongation
3407 O_ErmoMG15287_complete:A_ErmoMG_comp37020_c0_seq1
525bp
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
3408 O_ErmoMG15289_complete:A_ErmoMG_comp37020_c0_seq3
525bp
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
3409 O_ErmoMG1528_3prime_partial:A_ErmoMG_comp19909_c0_seq1
196bp
PREDICTED:_uncharacterized_protein_LOC106104701,_partial_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3410 O_ErmoMG15290_complete:A_ErmoMG_comp37021_c0_seq2
341bp
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0000793 C condensed chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004708 F MAP kinase kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007362 P terminal region determination
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0040018 P positive regulation of multicellular organism growth
GO:0042386 P hemocyte differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071481 P cellular response to X-ray
3411 O_ErmoMG15291_complete:A_ErmoMG_comp37022_c0_seq1
280bp
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006613 P cotranslational protein targeting to membrane
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0036498 P IRE1-mediated unfolded protein response
3412 O_ErmoMG15292_complete:A_ErmoMG_comp37023_c0_seq1
274bp
GO:0000502 C proteasome complex
GO:0002376 P immune system process
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0019773 C proteasome core complex, alpha-subunit complex
GO:0051603 P proteolysis involved in cellular protein catabolic process
3413 O_ErmoMG15293_complete:A_ErmoMG_comp37023_c0_seq2
274bp
GO:0000502 C proteasome complex
GO:0002376 P immune system process
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0019773 C proteasome core complex, alpha-subunit complex
GO:0051603 P proteolysis involved in cellular protein catabolic process
3414 O_ErmoMG15298_complete:A_ErmoMG_comp37024_c0_seq8
211bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
3415 O_ErmoMG1529_internal:A_ErmoMG_comp19909_c0_seq2
385bp
PREDICTED:_CAS1_domain-containing_protein_1-like_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3416 O_ErmoMG15301_internal:A_ErmoMG_comp37024_c0_seq10
224bp
3417 O_ErmoMG15303_complete:A_ErmoMG_comp37025_c0_seq1
759bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3418 O_ErmoMG15305_5prime_partial:A_ErmoMG_comp37026_c0_seq2
401bp
3419 O_ErmoMG15306_5prime_partial:A_ErmoMG_comp37026_c1_seq1
235bp
3420 O_ErmoMG15307_internal:A_ErmoMG_comp37026_c1_seq2
200bp
previous next from show/15068

- SilkBase 1999-2023 -