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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2341 O_ErmoMG13590_3prime_partial:A_ErmoMG_comp36574_c1_seq4
1175bp
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0035613 F RNA stem-loop binding
GO:0043039 P tRNA aminoacylation
GO:0051020 F GTPase binding
GO:0071346 P cellular response to interferon-gamma
GO:0097452 C GAIT complex
2342 O_ErmoMG13593_complete:A_ErmoMG_comp36576_c0_seq1
100bp
2343 O_ErmoMG13594_complete:A_ErmoMG_comp36577_c0_seq1
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2344 O_ErmoMG13596_complete:A_ErmoMG_comp36577_c0_seq2
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2345 O_ErmoMG13599_complete:A_ErmoMG_comp36577_c0_seq3
200bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2346 O_ErmoMG1359_complete:A_ErmoMG_comp19454_c0_seq1
143bp
PREDICTED:_thioredoxin,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006662 P glycerol ether metabolic process
GO:0015035 F protein-disulfide reductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0034599 P cellular response to oxidative stress
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
2347 O_ErmoMG13601_complete:A_ErmoMG_comp36577_c0_seq3
150bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0016020 C membrane
2348 O_ErmoMG13603_complete:A_ErmoMG_comp36577_c0_seq4
515bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0016020 C membrane
2349 O_ErmoMG13606_complete:A_ErmoMG_comp36577_c0_seq5
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2350 O_ErmoMG13609_complete:A_ErmoMG_comp36577_c0_seq6
200bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2351 O_ErmoMG1360_complete:A_ErmoMG_comp19457_c0_seq1
241bp
Alcohol_dehydrogenase_[Operophtera_brumata]
GO:0003824 F catalytic activity
GO:0004957 F prostaglandin E receptor activity
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007565 P female pregnancy
GO:0007567 P parturition
GO:0008152 P metabolic process
GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016491 F oxidoreductase activity
GO:0030728 P ovulation
GO:0045786 P negative regulation of cell cycle
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070403 F NAD+ binding
GO:0070493 P thrombin-activated receptor signaling pathway
GO:0097070 P ductus arteriosus closure
2352 O_ErmoMG13610_complete:A_ErmoMG_comp36577_c0_seq6
150bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0016020 C membrane
2353 O_ErmoMG13612_complete:A_ErmoMG_comp36577_c0_seq7
351bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2354 O_ErmoMG13614_complete:A_ErmoMG_comp36577_c0_seq8
314bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005815 C microtubule organizing center
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015630 C microtubule cytoskeleton
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
2355 O_ErmoMG13615_complete:A_ErmoMG_comp36577_c0_seq8
200bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2356 O_ErmoMG13618_complete:A_ErmoMG_comp36577_c0_seq9
200bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2357 O_ErmoMG13619_complete:A_ErmoMG_comp36577_c0_seq9
150bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0016020 C membrane
2358 O_ErmoMG1361_internal:A_ErmoMG_comp19460_c0_seq2
204bp
PREDICTED:_tRNA_pseudouridine_synthase_A,_mitochondrial_[Amyelois_transitella]
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0004730 F pseudouridylate synthase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
GO:0070902 P mitochondrial tRNA pseudouridine synthesis
2359 O_ErmoMG13621_complete:A_ErmoMG_comp36577_c0_seq10
200bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
2360 O_ErmoMG13623_complete:A_ErmoMG_comp36577_c0_seq10
150bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0016020 C membrane
2361 O_ErmoMG13625_complete:A_ErmoMG_comp36580_c0_seq1
523bp
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
2362 O_ErmoMG13626_5prime_partial:A_ErmoMG_comp36583_c1_seq1
553bp
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001525 P angiogenesis
GO:0001666 P response to hypoxia
GO:0002548 P monocyte chemotaxis
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005021 F vascular endothelial growth factor-activated receptor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006935 P chemotaxis
GO:0006940 P regulation of smooth muscle contraction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0010863 P positive regulation of phospholipase C activity
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019838 F growth factor binding
GO:0030154 P cell differentiation
GO:0030335 P positive regulation of cell migration
GO:0030522 P intracellular receptor signaling pathway
GO:0030949 P positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0036323 P vascular endothelial growth factor receptor-1 signaling pathway
GO:0036326 F vascular endothelial growth factor-activated receptor activity
GO:0036327 F vascular endothelial growth factor-activated receptor activity
GO:0036332 F placental growth factor-activated receptor activity
GO:0038084 P vascular endothelial growth factor signaling pathway
GO:0043235 C receptor complex
GO:0043406 P positive regulation of MAP kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045766 P positive regulation of angiogenesis
GO:0046777 P protein autophosphorylation
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048514 P blood vessel morphogenesis
GO:0048598 P embryonic morphogenesis
GO:0048661 P positive regulation of smooth muscle cell proliferation
2363 O_ErmoMG13628_complete:A_ErmoMG_comp36584_c0_seq1
328bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008063 P Toll signaling pathway
GO:0008134 F transcription factor binding
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0030097 P hemopoiesis
GO:0031594 C neuromuscular junction
GO:0042308 P negative regulation of protein import into nucleus
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0045087 P innate immune response
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
2364 O_ErmoMG13629_complete:A_ErmoMG_comp36585_c0_seq1
187bp
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
2365 O_ErmoMG13631_complete:A_ErmoMG_comp36585_c0_seq2
134bp
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
2366 O_ErmoMG13632_complete:A_ErmoMG_comp36586_c0_seq1
138bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2367 O_ErmoMG13634_internal:A_ErmoMG_comp36587_c0_seq1
528bp
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005262 F calcium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0048060 P negative gravitaxis
GO:0050896 P response to stimulus
GO:0051290 P protein heterotetramerization
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0098655 P cation transmembrane transport
2368 O_ErmoMG13635_3prime_partial:A_ErmoMG_comp36588_c0_seq1
204bp
2369 O_ErmoMG13636_3prime_partial:A_ErmoMG_comp36589_c0_seq1
387bp
2370 O_ErmoMG13638_complete:A_ErmoMG_comp36589_c0_seq1
116bp
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