SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/15068
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2101 O_ErmoMG13226_5prime_partial:A_ErmoMG_comp36479_c0_seq4
146bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
2102 O_ErmoMG13227_5prime_partial:A_ErmoMG_comp36479_c0_seq5
175bp
GO:0005519 F cytoskeletal regulatory protein binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007318 P pole plasm protein localization
GO:0015031 P protein transport
GO:0031532 P actin cytoskeleton reorganization
2103 O_ErmoMG13228_3prime_partial:A_ErmoMG_comp36479_c0_seq6
619bp
GO:0005519 F cytoskeletal regulatory protein binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007318 P pole plasm protein localization
GO:0015031 P protein transport
GO:0031532 P actin cytoskeleton reorganization
2104 O_ErmoMG13233_3prime_partial:A_ErmoMG_comp36480_c0_seq1
641bp
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2105 O_ErmoMG13236_5prime_partial:A_ErmoMG_comp36481_c0_seq1
429bp
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2106 O_ErmoMG13237_5prime_partial:A_ErmoMG_comp36481_c0_seq3
429bp
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
2107 O_ErmoMG13238_internal:A_ErmoMG_comp36482_c0_seq1
319bp
GO:0003735 F structural constituent of ribosome
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
2108 O_ErmoMG13239_5prime_partial:A_ErmoMG_comp36483_c0_seq2
605bp
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0048193 P Golgi vesicle transport
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070939 C Dsl1/NZR complex
GO:1902504 P mitotic G2 DNA damage checkpoint signaling
2109 O_ErmoMG1323_5prime_partial:A_ErmoMG_comp19371_c0_seq1
235bp
PREDICTED:_uncharacterized_protein_LOC101742051_isoform_X2_[Bombyx_mori]
2110 O_ErmoMG13241_3prime_partial:A_ErmoMG_comp36484_c0_seq1
243bp
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0031167 P rRNA methylation
GO:0032259 P methylation
2111 O_ErmoMG13242_5prime_partial:A_ErmoMG_comp36484_c0_seq2
110bp
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003712 F transcription coregulator activity
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0006390 P mitochondrial transcription
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:1903506 P regulation of nucleic acid-templated transcription
2112 O_ErmoMG13243_complete:A_ErmoMG_comp36485_c0_seq1
396bp
GO:0001541 P ovarian follicle development
GO:0003824 F catalytic activity
GO:0004105 F choline-phosphate cytidylyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0007283 P spermatogenesis
GO:0008654 P phospholipid biosynthetic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2113 O_ErmoMG13247_5prime_partial:A_ErmoMG_comp36488_c0_seq1
146bp
2114 O_ErmoMG13249_internal:A_ErmoMG_comp36488_c0_seq3
172bp
2115 O_ErmoMG13253_5prime_partial:A_ErmoMG_comp36489_c0_seq1
162bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2116 O_ErmoMG13254_internal:A_ErmoMG_comp36489_c0_seq2
202bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000281 P mitotic cytokinesis
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006886 P intracellular protein transport
GO:0007219 P Notch signaling pathway
GO:0007423 P sensory organ development
GO:0007472 P wing disc morphogenesis
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008593 P regulation of Notch signaling pathway
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0030100 P regulation of endocytosis
GO:0036257 P multivesicular body organization
GO:0045035 P sensory organ precursor cell division
GO:0045732 P positive regulation of protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048749 P compound eye development
2117 O_ErmoMG13256_5prime_partial:A_ErmoMG_comp36489_c0_seq3
146bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2118 O_ErmoMG13257_complete:A_ErmoMG_comp36490_c2_seq1
454bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2119 O_ErmoMG13259_internal:A_ErmoMG_comp36491_c0_seq1
379bp
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006649 P phospholipid transfer to membrane
GO:0006810 P transport
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045332 P phospholipid translocation
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
2120 O_ErmoMG1325_3prime_partial:A_ErmoMG_comp19374_c0_seq1
366bp
PREDICTED:_ribosome_biogenesis_protein_BRX1_homolog_[Amyelois_transitella]
GO:0000027 P ribosomal large subunit assembly
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
2121 O_ErmoMG13260_internal:A_ErmoMG_comp36491_c2_seq1
154bp
GO:0000166 F nucleotide binding
GO:0002790 P peptide secretion
GO:0005102 F signaling receptor binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006497 P protein lipidation
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006911 P phagocytosis, engulfment
GO:0007040 P lysosome organization
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008509 F anion transmembrane transporter activity
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0015485 F cholesterol binding
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019905 F syntaxin binding
GO:0030139 C endocytic vesicle
GO:0030301 P cholesterol transport
GO:0030819 P obsolete positive regulation of cAMP biosynthetic process
GO:0031267 F small GTPase binding
GO:0032367 P intracellular cholesterol transport
GO:0032489 P regulation of Cdc42 protein signal transduction
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0034185 F apolipoprotein binding
GO:0034186 F apolipoprotein A-I binding
GO:0034188 F apolipoprotein A-I receptor activity
GO:0034364 C high-density lipoprotein particle
GO:0034380 P high-density lipoprotein particle assembly
GO:0034616 P response to laminar fluid shear stress
GO:0038027 P apolipoprotein A-I-mediated signaling pathway
GO:0042157 P lipoprotein metabolic process
GO:0042158 P lipoprotein biosynthetic process
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043231 C intracellular membrane-bounded organelle
GO:0043691 P reverse cholesterol transport
GO:0045121 C membrane raft
GO:0045332 P phospholipid translocation
GO:0045335 C phagocytic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0050702 P interleukin-1 beta production
GO:0051117 F ATPase binding
GO:0055091 P phospholipid homeostasis
GO:0055098 P cellular response to low-density lipoprotein particle stimulus
GO:0060155 P platelet dense granule organization
GO:0071222 P cellular response to lipopolysaccharide
GO:0071300 P cellular response to retinoic acid
GO:0071397 P cellular response to cholesterol
GO:0098656 P anion transmembrane transport
2122 O_ErmoMG13261_internal:A_ErmoMG_comp36491_c2_seq2
356bp
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0044267 P cellular protein metabolic process
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097232 C lamellar body membrane
GO:0097233 C alveolar lamellar body membrane
2123 O_ErmoMG13264_5prime_partial:A_ErmoMG_comp36493_c0_seq2
484bp
GO:0002433 P immune response-regulating cell surface receptor signaling pathway involved in phagocytosis
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0006909 P phagocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0042116 P macrophage activation
GO:0048102 P autophagic cell death
GO:0050764 P regulation of phagocytosis
GO:0060099 P regulation of phagocytosis, engulfment
GO:0090382 P phagosome maturation
2124 O_ErmoMG13265_5prime_partial:A_ErmoMG_comp36493_c0_seq4
483bp
GO:0002433 P immune response-regulating cell surface receptor signaling pathway involved in phagocytosis
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0006909 P phagocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0042116 P macrophage activation
GO:0048102 P autophagic cell death
GO:0050764 P regulation of phagocytosis
GO:0060099 P regulation of phagocytosis, engulfment
GO:0090382 P phagosome maturation
2125 O_ErmoMG13266_5prime_partial:A_ErmoMG_comp36496_c0_seq1
572bp
GO:0004347 F glucose-6-phosphate isomerase activity
GO:0005737 C cytoplasm
GO:0006094 P gluconeogenesis
GO:0006096 P glycolytic process
GO:0016853 F isomerase activity
2126 O_ErmoMG13269_complete:A_ErmoMG_comp36497_c1_seq1
785bp
GO:0000278 P mitotic cell cycle
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007015 P actin filament organization
GO:0007419 P ventral cord development
GO:0008023 C transcription elongation factor complex
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0008360 P regulation of cell shape
GO:0009408 P response to heat
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019901 F protein kinase binding
GO:0032783 C super elongation complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
2127 O_ErmoMG13270_complete:A_ErmoMG_comp36498_c0_seq2
325bp
2128 O_ErmoMG13273_complete:A_ErmoMG_comp36498_c0_seq3
459bp
2129 O_ErmoMG13276_complete:A_ErmoMG_comp36498_c0_seq4
225bp
2130 O_ErmoMG13278_complete:A_ErmoMG_comp36498_c0_seq5
324bp
previous next from show/15068

- SilkBase 1999-2023 -