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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9991 O_BomoSK18994_internal:A_BomoSK_comp14194_c2_seq1
160bp
GO:0001501 P skeletal system development
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005540 F hyaluronic acid binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0007417 P central nervous system development
GO:0030246 F carbohydrate binding
9992 O_BomoSK18995_complete:A_BomoSK_comp14194_c2_seq2
8839bp
GO:0001527 C microfibril
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0030326 P embryonic limb morphogenesis
GO:0030501 P positive regulation of bone mineralization
GO:0031012 C extracellular matrix
GO:0035108 P limb morphogenesis
GO:0035583 P sequestering of TGFbeta in extracellular matrix
GO:0043010 P camera-type eye development
GO:0045669 P positive regulation of osteoblast differentiation
GO:0048048 P embryonic eye morphogenesis
GO:0060346 P bone trabecula formation
9993 O_BomoSK18996_complete:A_BomoSK_comp14194_c2_seq2
230bp
9994 O_BomoSK18997_complete:A_BomoSK_comp14194_c2_seq2
175bp
9995 O_BomoSK18998_complete:A_BomoSK_comp14194_c2_seq2
158bp
9996 O_BomoSK18999_complete:A_BomoSK_comp14194_c2_seq2
148bp
9997 O_BomoSK1899_5prime_partial:A_BomoSK_comp4715_c0_seq1
206bp
 PREDICTED:_crossover_junction_endonuclease_EME1-like_[Plutella_xylostella]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005720 C heterochromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0072429 P response to intra-S DNA damage checkpoint signaling
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9998 O_BomoSK189_5prime_partial:A_BomoSK_comp631_c1_seq2
138bp
 hypothetical_protein_KGM_01195_[Danaus_plexippus]
9999 O_BomoSK18_internal:A_BomoSK_comp97_c0_seq2
102bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10000 O_BomoSK19000_complete:A_BomoSK_comp14194_c2_seq2
118bp
10001 O_BomoSK19001_complete:A_BomoSK_comp14194_c2_seq2
116bp
10002 O_BomoSK19002_complete:A_BomoSK_comp14194_c2_seq2
115bp
10003 O_BomoSK19003_complete:A_BomoSK_comp14194_c2_seq2
114bp
10004 O_BomoSK19004_complete:A_BomoSK_comp14194_c2_seq2
113bp
10005 O_BomoSK19005_complete:A_BomoSK_comp14194_c2_seq2
110bp
10006 O_BomoSK19006_complete:A_BomoSK_comp14194_c2_seq2
110bp
10007 O_BomoSK19007_complete:A_BomoSK_comp14194_c2_seq2
109bp
10008 O_BomoSK19008_complete:A_BomoSK_comp14194_c2_seq2
107bp
10009 O_BomoSK19009_complete:A_BomoSK_comp14194_c2_seq2
106bp
10010 O_BomoSK1900_3prime_partial:A_BomoSK_comp4715_c0_seq1
133bp
 DEHA2E21384p_[Debaryomyces_hansenii_CBS767]
10011 O_BomoSK19010_complete:A_BomoSK_comp14194_c2_seq2
105bp
10012 O_BomoSK19011_5prime_partial:A_BomoSK_comp14194_c2_seq3
4129bp
GO:0001525 P angiogenesis
GO:0001756 P somitogenesis
GO:0001840 P neural plate development
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021514 P ventral spinal cord interneuron differentiation
GO:0021523 P somatic motor neuron differentiation
GO:0021531 P spinal cord radial glial cell differentiation
GO:0021986 P habenula development
GO:0030154 P cell differentiation
GO:0031016 P pancreas development
GO:0031017 P exocrine pancreas development
GO:0035907 P dorsal aorta development
GO:0042663 P regulation of endodermal cell fate specification
GO:0046872 F metal ion binding
GO:0048259 P regulation of receptor-mediated endocytosis
GO:0048337 P positive regulation of mesodermal cell fate specification
GO:0048699 P generation of neurons
GO:0048936 P peripheral nervous system neuron axonogenesis
GO:0050768 P negative regulation of neurogenesis
GO:0050793 P regulation of developmental process
GO:0055016 P hypochord development
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
10013 O_BomoSK19012_complete:A_BomoSK_comp14194_c2_seq3
181bp
10014 O_BomoSK19013_complete:A_BomoSK_comp14194_c2_seq3
175bp
10015 O_BomoSK19014_complete:A_BomoSK_comp14194_c2_seq3
150bp
10016 O_BomoSK19015_complete:A_BomoSK_comp14194_c2_seq3
110bp
10017 O_BomoSK19016_complete:A_BomoSK_comp14194_c2_seq3
105bp
10018 O_BomoSK19017_complete:A_BomoSK_comp14194_c2_seq3
104bp
10019 O_BomoSK19018_complete:A_BomoSK_comp14194_c2_seq3
102bp
10020 O_BomoSK19019_complete:A_BomoSK_comp14194_c2_seq4
9097bp
GO:0001527 C microfibril
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0009653 P anatomical structure morphogenesis
GO:0090287 P regulation of cellular response to growth factor stimulus
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