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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9901 O_BomoSK18912_3prime_partial:A_BomoSK_comp14183_c0_seq1
229bp
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007496 P anterior midgut development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0010468 P regulation of gene expression
GO:0016202 P regulation of striated muscle tissue development
GO:0019730 P antimicrobial humoral response
GO:0019915 P lipid storage
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045475 P locomotor rhythm
GO:0046983 F protein dimerization activity
GO:0048747 P muscle cell development
GO:0052576 P carbohydrate storage
9902 O_BomoSK18913_complete:A_BomoSK_comp14183_c0_seq1
134bp
9903 O_BomoSK18914_3prime_partial:A_BomoSK_comp14183_c0_seq3
233bp
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007496 P anterior midgut development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0010468 P regulation of gene expression
GO:0016202 P regulation of striated muscle tissue development
GO:0019730 P antimicrobial humoral response
GO:0019915 P lipid storage
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045475 P locomotor rhythm
GO:0046983 F protein dimerization activity
GO:0048747 P muscle cell development
GO:0052576 P carbohydrate storage
9904 O_BomoSK18915_complete:A_BomoSK_comp14183_c0_seq3
134bp
9905 O_BomoSK18916_complete:A_BomoSK_comp14184_c0_seq1
711bp
9906 O_BomoSK18917_complete:A_BomoSK_comp14184_c0_seq1
176bp
9907 O_BomoSK18918_complete:A_BomoSK_comp14184_c0_seq2
563bp
9908 O_BomoSK18919_complete:A_BomoSK_comp14184_c0_seq2
176bp
9909 O_BomoSK1891_complete:A_BomoSK_comp4701_c0_seq2
112bp
 putative_RNase_BN,_tRNA_processing_enzyme_[Candidatus_Protochlamydia_amoebophila]
9910 O_BomoSK18920_complete:A_BomoSK_comp14184_c0_seq3
655bp
9911 O_BomoSK18921_complete:A_BomoSK_comp14184_c0_seq3
176bp
9912 O_BomoSK18922_internal:A_BomoSK_comp14185_c0_seq1
3081bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
9913 O_BomoSK18923_complete:A_BomoSK_comp14185_c0_seq1
243bp
9914 O_BomoSK18924_complete:A_BomoSK_comp14185_c0_seq1
168bp
9915 O_BomoSK18925_complete:A_BomoSK_comp14185_c0_seq1
130bp
9916 O_BomoSK18926_complete:A_BomoSK_comp14185_c0_seq1
114bp
9917 O_BomoSK18927_complete:A_BomoSK_comp14185_c0_seq1
106bp
9918 O_BomoSK18928_complete:A_BomoSK_comp14185_c0_seq1
105bp
9919 O_BomoSK18929_complete:A_BomoSK_comp14186_c0_seq3
177bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
9920 O_BomoSK1892_5prime_partial:A_BomoSK_comp4704_c0_seq1
419bp
 PREDICTED:_histone_deacetylase_6_isoform_X2_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000209 P protein polyubiquitination
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003779 F actin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005881 C cytoplasmic microtubule
GO:0005901 C caveola
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006886 P intracellular protein transport
GO:0007026 P negative regulation of microtubule depolymerization
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0009636 P response to toxic substance
GO:0009967 P positive regulation of signal transduction
GO:0010033 P response to organic substance
GO:0010469 P regulation of signaling receptor activity
GO:0010634 P positive regulation of epithelial cell migration
GO:0010870 P obsolete positive regulation of receptor biosynthetic process
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0030286 C dynein complex
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031252 C cell leading edge
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031625 F ubiquitin protein ligase binding
GO:0031647 P regulation of protein stability
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032418 P lysosome localization
GO:0034983 P peptidyl-lysine deacetylation
GO:0035967 P cellular response to topologically incorrect protein
GO:0040029 P regulation of gene expression, epigenetic
GO:0042826 F histone deacetylase binding
GO:0042903 F tubulin deacetylase activity
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043014 F alpha-tubulin binding
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043204 C perikaryon
GO:0043234 C protein-containing complex
GO:0043241 P protein-containing complex disassembly
GO:0043242 P negative regulation of protein-containing complex disassembly
GO:0044297 C cell body
GO:0045598 P regulation of fat cell differentiation
GO:0045861 P negative regulation of proteolysis
GO:0046872 F metal ion binding
GO:0048156 F tau protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0048668 P collateral sprouting
GO:0051646 P mitochondrion localization
GO:0051787 F misfolded protein binding
GO:0051788 P response to misfolded protein
GO:0051879 F Hsp90 protein binding
GO:0060997 P dendritic spine morphogenesis
GO:0070201 P regulation of establishment of protein localization
GO:0070301 P cellular response to hydrogen peroxide
GO:0070840 F dynein complex binding
GO:0070842 P aggresome assembly
GO:0070845 P polyubiquitinated misfolded protein transport
GO:0070846 P Hsp90 deacetylation
GO:0070848 P response to growth factor
GO:0070932 P histone H3 deacetylation
GO:0071218 P cellular response to misfolded protein
GO:0090035 P positive regulation of chaperone-mediated protein complex assembly
GO:0090042 P tubulin deacetylation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901300 P positive regulation of hydrogen peroxide-mediated programmed cell death
9921 O_BomoSK18930_complete:A_BomoSK_comp14186_c0_seq7
193bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
9922 O_BomoSK18931_complete:A_BomoSK_comp14186_c0_seq10
267bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
9923 O_BomoSK18932_complete:A_BomoSK_comp14186_c0_seq11
103bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
9924 O_BomoSK18933_3prime_partial:A_BomoSK_comp14187_c0_seq1
130bp
9925 O_BomoSK18934_complete:A_BomoSK_comp14187_c0_seq1
129bp
9926 O_BomoSK18935_complete:A_BomoSK_comp14187_c0_seq2
113bp
9927 O_BomoSK18936_complete:A_BomoSK_comp14187_c0_seq3
113bp
9928 O_BomoSK18937_complete:A_BomoSK_comp14187_c0_seq4
405bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016363 C nuclear matrix
GO:0030529 C ribonucleoprotein complex
GO:0048306 F calcium-dependent protein binding
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
9929 O_BomoSK18938_complete:A_BomoSK_comp14187_c0_seq4
129bp
9930 O_BomoSK18939_5prime_partial:A_BomoSK_comp14187_c0_seq5
135bp
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