SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/33939
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9811 O_BomoSK18831_complete:A_BomoSK_comp14177_c0_seq1
173bp
9812 O_BomoSK18832_3prime_partial:A_BomoSK_comp14177_c0_seq2
275bp
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0003823 F antigen binding
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006461 P protein-containing complex assembly
GO:0007059 P chromosome segregation
GO:0007143 P female meiotic nuclear division
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051232 P meiotic spindle elongation
GO:0051306 P mitotic sister chromatid separation
GO:0051754 P meiotic sister chromatid cohesion, centromeric
GO:0070062 C extracellular exosome
GO:0070262 P peptidyl-serine dephosphorylation
GO:1903538 P regulation of meiotic cell cycle process involved in oocyte maturation
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
9813 O_BomoSK18833_complete:A_BomoSK_comp14177_c0_seq3
591bp
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0003823 F antigen binding
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006461 P protein-containing complex assembly
GO:0007059 P chromosome segregation
GO:0007143 P female meiotic nuclear division
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051232 P meiotic spindle elongation
GO:0051306 P mitotic sister chromatid separation
GO:0051754 P meiotic sister chromatid cohesion, centromeric
GO:0070062 C extracellular exosome
GO:0070262 P peptidyl-serine dephosphorylation
GO:1903538 P regulation of meiotic cell cycle process involved in oocyte maturation
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
9814 O_BomoSK18834_complete:A_BomoSK_comp14177_c0_seq3
173bp
9815 O_BomoSK18835_complete:A_BomoSK_comp14177_c0_seq4
591bp
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0003823 F antigen binding
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006461 P protein-containing complex assembly
GO:0007059 P chromosome segregation
GO:0007143 P female meiotic nuclear division
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051232 P meiotic spindle elongation
GO:0051306 P mitotic sister chromatid separation
GO:0051754 P meiotic sister chromatid cohesion, centromeric
GO:0070062 C extracellular exosome
GO:0070262 P peptidyl-serine dephosphorylation
GO:1903538 P regulation of meiotic cell cycle process involved in oocyte maturation
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
9816 O_BomoSK18836_complete:A_BomoSK_comp14177_c0_seq4
173bp
9817 O_BomoSK18837_5prime_partial:A_BomoSK_comp14180_c0_seq1
941bp
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031513 C non-motile cilium
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
9818 O_BomoSK18838_complete:A_BomoSK_comp14180_c0_seq1
131bp
9819 O_BomoSK18839_complete:A_BomoSK_comp14180_c0_seq1
125bp
9820 O_BomoSK1883_5prime_partial:A_BomoSK_comp4696_c0_seq1
127bp
 arsenic_transporter_[Alcanivorax_sp._Nap_24]
9821 O_BomoSK18840_complete:A_BomoSK_comp14180_c0_seq1
100bp
9822 O_BomoSK18841_3prime_partial:A_BomoSK_comp14180_c0_seq2
807bp
9823 O_BomoSK18842_5prime_partial:A_BomoSK_comp14180_c0_seq3
391bp
9824 O_BomoSK18843_complete:A_BomoSK_comp14180_c0_seq3
125bp
9825 O_BomoSK18844_5prime_partial:A_BomoSK_comp14180_c0_seq4
935bp
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031513 C non-motile cilium
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
9826 O_BomoSK18845_complete:A_BomoSK_comp14180_c0_seq4
240bp
9827 O_BomoSK18846_complete:A_BomoSK_comp14180_c0_seq4
133bp
9828 O_BomoSK18847_complete:A_BomoSK_comp14180_c0_seq4
125bp
9829 O_BomoSK18848_complete:A_BomoSK_comp14180_c0_seq4
100bp
9830 O_BomoSK18849_3prime_partial:A_BomoSK_comp14180_c0_seq5
612bp
9831 O_BomoSK1884_internal:A_BomoSK_comp4700_c0_seq1
766bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_myosin_IA_heavy_chain_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005902 C microvillus
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007423 P sensory organ development
GO:0007469 P antennal development
GO:0007605 P sensory perception of sound
GO:0008152 P metabolic process
GO:0008407 P chaeta morphogenesis
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0031477 C myosin VII complex
GO:0031941 C filamentous actin
GO:0032027 F myosin light chain binding
GO:0032529 P follicle cell microvillus organization
GO:0035182 C female germline ring canal outer rim
GO:0035293 P chitin-based larval cuticle pattern formation
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042623 F ATP hydrolysis activity
GO:0045179 C apical cortex
GO:0045180 C basal cortex
GO:0045296 F cadherin binding
GO:0048800 P antennal morphogenesis
GO:0070825 C micropyle
9832 O_BomoSK18850_3prime_partial:A_BomoSK_comp14180_c0_seq6
842bp
9833 O_BomoSK18851_3prime_partial:A_BomoSK_comp14180_c0_seq7
812bp
9834 O_BomoSK18852_3prime_partial:A_BomoSK_comp14180_c0_seq8
604bp
9835 O_BomoSK18853_3prime_partial:A_BomoSK_comp14180_c0_seq9
779bp
9836 O_BomoSK18854_5prime_partial:A_BomoSK_comp14180_c0_seq10
941bp
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031513 C non-motile cilium
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
9837 O_BomoSK18855_complete:A_BomoSK_comp14180_c0_seq10
240bp
9838 O_BomoSK18856_complete:A_BomoSK_comp14180_c0_seq10
133bp
9839 O_BomoSK18857_complete:A_BomoSK_comp14180_c0_seq10
125bp
9840 O_BomoSK18858_complete:A_BomoSK_comp14180_c0_seq10
100bp
previous next from show/33939

- SilkBase 1999-2023 -