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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
961 O_BomoSK10866_complete:A_BomoSK_comp12402_c0_seq1
128bp
 beta-galactosidase_[Anaerolinea_thermolimosa]
962 O_BomoSK10867_complete:A_BomoSK_comp12403_c0_seq1
441bp
 PREDICTED:_cell_division_cycle_and_apoptosis_regulator_protein_1-like_[Amyelois_transitella]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
963 O_BomoSK10868_5prime_partial:A_BomoSK_comp12403_c0_seq1
125bp
 hypothetical_protein_[Frankia_sp._DC12]
964 O_BomoSK10869_3prime_partial:A_BomoSK_comp12403_c0_seq2
998bp
 PREDICTED:_cell_division_cycle_and_apoptosis_regulator_protein_1-like_isoform_X1_[Papilio_machaon]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
965 O_BomoSK1086_complete:A_BomoSK_comp3871_c0_seq1
514bp
 PREDICTED:_myoneurin-like_[Papilio_polytes]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
966 O_BomoSK10870_3prime_partial:A_BomoSK_comp12406_c0_seq1
464bp
 PREDICTED:_exocyst_complex_component_6_[Papilio_polytes]
GO:0000145 C exocyst
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
967 O_BomoSK10871_5prime_partial:A_BomoSK_comp12406_c0_seq1
123bp
 PREDICTED:_hexokinase-3_isoform_X3_[Nothobranchius_furzeri]
968 O_BomoSK10872_complete:A_BomoSK_comp12406_c0_seq1
100bp
 hypothetical_protein_HMPREF2087_01480_[Helicobacter_canis_NCTC_12740]
969 O_BomoSK10873_complete:A_BomoSK_comp12406_c0_seq2
365bp
 PREDICTED:_exocyst_complex_component_6_[Papilio_polytes]
GO:0000145 C exocyst
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
970 O_BomoSK10874_complete:A_BomoSK_comp12406_c0_seq2
100bp
 hypothetical_protein_HMPREF2087_01480_[Helicobacter_canis_NCTC_12740]
971 O_BomoSK10875_3prime_partial:A_BomoSK_comp12407_c0_seq1
222bp
 PREDICTED:_uncharacterized_Golgi_apparatus_membrane_protein-like_protein_CG5021_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
972 O_BomoSK10876_complete:A_BomoSK_comp12407_c0_seq2
217bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
973 O_BomoSK10877_complete:A_BomoSK_comp12407_c0_seq3
212bp
 hypothetical_protein_KGM_15116_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
974 O_BomoSK10878_3prime_partial:A_BomoSK_comp12407_c0_seq4
217bp
 PREDICTED:_uncharacterized_Golgi_apparatus_membrane_protein-like_protein_CG5021_isoform_X2_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030173 C integral component of Golgi membrane
975 O_BomoSK10879_complete:A_BomoSK_comp12408_c0_seq1
201bp
 PREDICTED:_uncharacterized_protein_LOC692929_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042273 P ribosomal large subunit biogenesis
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
976 O_BomoSK1087_3prime_partial:A_BomoSK_comp3872_c0_seq1
141bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_pleiotropic_regulator_1,_partial_[Plutella_xylostella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
977 O_BomoSK10880_complete:A_BomoSK_comp12408_c0_seq2
235bp
 PREDICTED:_protein_DPCD_isoform_X1_[Amyelois_transitella]
GO:0003351 P epithelial cilium movement involved in extracellular fluid movement
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0007368 P determination of left/right symmetry
GO:0021591 P ventricular system development
GO:0021670 P lateral ventricle development
GO:0021678 P third ventricle development
GO:0030317 P flagellated sperm motility
GO:0060972 P left/right pattern formation
978 O_BomoSK10881_complete:A_BomoSK_comp12408_c0_seq2
201bp
 PREDICTED:_uncharacterized_protein_LOC692929_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042273 P ribosomal large subunit biogenesis
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
979 O_BomoSK10882_complete:A_BomoSK_comp12408_c0_seq3
212bp
 PREDICTED:_protein_DPCD_isoform_X1_[Amyelois_transitella]
GO:0003351 P epithelial cilium movement involved in extracellular fluid movement
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0007368 P determination of left/right symmetry
GO:0021591 P ventricular system development
GO:0021670 P lateral ventricle development
GO:0021678 P third ventricle development
GO:0030317 P flagellated sperm motility
GO:0060972 P left/right pattern formation
980 O_BomoSK10883_complete:A_BomoSK_comp12410_c1_seq2
521bp
 PREDICTED:_sensory_neuron_membrane_protein_2-like_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
981 O_BomoSK10884_5prime_partial:A_BomoSK_comp12410_c1_seq2
107bp
 hypothetical_protein_[Streptomyces_lavendulae]
982 O_BomoSK10885_complete:A_BomoSK_comp12412_c0_seq1
421bp
 PREDICTED:_autophagy-related_protein_13_homolog_[Papilio_xuthus]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006914 P autophagy
GO:0010506 P regulation of autophagy
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0032147 P activation of protein kinase activity
GO:0035096 P larval midgut cell programmed cell death
GO:0045850 P positive regulation of nurse cell apoptotic process
GO:1990316 C Atg1/ULK1 kinase complex
983 O_BomoSK10886_complete:A_BomoSK_comp12412_c0_seq1
169bp
 PREDICTED:_MIP18_family_protein_CG30152_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005876 C spindle microtubule
GO:0007059 P chromosome segregation
GO:0016226 P iron-sulfur cluster assembly
GO:0098813 P nuclear chromosome segregation
984 O_BomoSK10887_complete:A_BomoSK_comp12412_c0_seq2
421bp
 PREDICTED:_autophagy-related_protein_13_homolog_[Papilio_xuthus]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006914 P autophagy
GO:0010506 P regulation of autophagy
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0032147 P activation of protein kinase activity
GO:0035096 P larval midgut cell programmed cell death
GO:0045850 P positive regulation of nurse cell apoptotic process
GO:1990316 C Atg1/ULK1 kinase complex
985 O_BomoSK10888_complete:A_BomoSK_comp12414_c0_seq1
265bp
 PREDICTED:_dual_specificity_protein_phosphatase_23-like_isoform_X2_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0070062 C extracellular exosome
986 O_BomoSK10889_complete:A_BomoSK_comp12414_c0_seq2
173bp
 PREDICTED:_dual_specificity_protein_phosphatase_23-like_[Papilio_xuthus]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0070062 C extracellular exosome
987 O_BomoSK1088_internal:A_BomoSK_comp3872_c0_seq2
112bp
 Pleiotropic_regulator_1_[Papilio_machaon]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
988 O_BomoSK10890_complete:A_BomoSK_comp12416_c0_seq1
363bp
 PREDICTED:_protein_kinase_DC2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004691 F cAMP-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005952 C cAMP-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
989 O_BomoSK10891_complete:A_BomoSK_comp12416_c0_seq1
105bp
 hypothetical_protein_AC249_AIPGENE20018_[Exaiptasia_pallida]
990 O_BomoSK10892_3prime_partial:A_BomoSK_comp12417_c0_seq1
554bp
 PREDICTED:_oocyte_zinc_finger_protein_XlCOF6-like_isoform_X1_[Amyelois_transitella]
GO:0000976 F transcription cis-regulatory region binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042254 P ribosome biogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071294 P cellular response to zinc ion
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