Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
9031	O_BomoSK18129_complete:A_BomoSK_comp14081_c1_seq9 956bp	Bomo_Chr24		GO:0000166 F nucleotide binding GO:0001948 F protein binding GO:0003824 F catalytic activity GO:0004222 F metalloendopeptidase activity GO:0005102 F signaling receptor binding GO:0005524 F ATP binding GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005777 C peroxisome GO:0005782 C peroxisomal matrix GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0006508 P proteolysis GO:0008152 P metabolic process GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0008340 P determination of adult lifespan GO:0009986 C cell surface GO:0010815 P bradykinin catabolic process GO:0010992 P ubiquitin recycling GO:0016020 C membrane GO:0016485 P protein processing GO:0016787 F hydrolase activity GO:0032461 P positive regulation of protein oligomerization GO:0042277 F peptide binding GO:0042803 F protein homodimerization activity GO:0043130 F ubiquitin binding GO:0043171 P peptide catabolic process GO:0043559 F insulin binding GO:0046872 F metal ion binding GO:0050435 P amyloid-beta metabolic process GO:0051260 P protein homooligomerization GO:0051603 P proteolysis involved in cellular protein catabolic process GO:1901142 P insulin metabolic process GO:1901143 P insulin catabolic process
9032	O_BomoSK1812_5prime_partial:A_BomoSK_comp4607_c0_seq1 108bp	Bomo_Scaf034	PREDICTED:_TBC1_domain_family_member_14-like_[Bombyx_mori]	GO:0005096 F GTPase activator activity GO:0005776 C autophagosome GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006886 P intracellular protein transport GO:0010507 P negative regulation of autophagy GO:0017137 F small GTPase binding GO:0019901 F protein kinase binding GO:0031338 P regulation of vesicle fusion GO:0055037 C recycling endosome GO:0071955 P recycling endosome to Golgi transport GO:0090630 P activation of GTPase activity GO:2000785 P regulation of autophagosome assembly
9033	O_BomoSK18130_complete:A_BomoSK_comp14081_c1_seq9 131bp	Bomo_Chr24
9034	O_BomoSK18131_complete:A_BomoSK_comp14081_c1_seq9 108bp	Bomo_Chr24
9035	O_BomoSK18132_complete:A_BomoSK_comp14081_c1_seq9 103bp	Bomo_Chr24
9036	O_BomoSK18133_complete:A_BomoSK_comp14082_c0_seq1 1846bp	Bomo_Chr5		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0045892 P negative regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0071837 F HMG box domain binding
9037	O_BomoSK18134_complete:A_BomoSK_comp14082_c0_seq3 1855bp	Bomo_Chr5		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0045892 P negative regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0071837 F HMG box domain binding
9038	O_BomoSK18135_complete:A_BomoSK_comp14084_c0_seq2 457bp	Bomo_Chr15		GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0006810 P transport GO:0007275 P multicellular organism development GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
9039	O_BomoSK18136_complete:A_BomoSK_comp14084_c0_seq2 122bp	Bomo_Chr15
9040	O_BomoSK18137_complete:A_BomoSK_comp14084_c0_seq3 1364bp	Bomo_Chr15		GO:0000166 F nucleotide binding GO:0002576 P platelet degranulation GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008150 P biological_process GO:0008152 P metabolic process GO:0015662 F P-type ion transporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016323 C basolateral plasma membrane GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity GO:0016887 F ATP hydrolysis activity GO:0031088 C platelet dense granule membrane GO:0032310 P prostaglandin secretion GO:0034220 P ion transmembrane transport GO:0042384 P cilium assembly GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity GO:0055085 P transmembrane transport GO:0055114 P obsolete oxidation-reduction process GO:0098656 P anion transmembrane transport
9041	O_BomoSK18138_complete:A_BomoSK_comp14084_c0_seq3 145bp	Bomo_Chr15
9042	O_BomoSK18139_complete:A_BomoSK_comp14084_c0_seq3 122bp	Bomo_Chr15
9043	O_BomoSK1813_5prime_partial:A_BomoSK_comp4607_c0_seq1 102bp	Bomo_Scaf034	(2Fe-2S)-binding_protein_[Porphyrobacter_cryptus]
9044	O_BomoSK18140_complete:A_BomoSK_comp14084_c0_seq3 110bp	Bomo_Chr15
9045	O_BomoSK18141_5prime_partial:A_BomoSK_comp14085_c0_seq1 647bp	Bomo_Chr17		GO:0000166 F nucleotide binding GO:0000943 C retrotransposon nucleocapsid GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003723 F RNA binding GO:0003824 F catalytic activity GO:0003887 F DNA-directed DNA polymerase activity GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004523 F RNA-DNA hybrid ribonuclease activity GO:0004540 F ribonuclease activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006310 P DNA recombination GO:0006508 P proteolysis GO:0008152 P metabolic process GO:0008233 F peptidase activity GO:0008270 F zinc ion binding GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0019076 P viral release from host cell GO:0032197 P transposition, RNA-mediated GO:0046872 F metal ion binding GO:0071897 P DNA biosynthetic process GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9046	O_BomoSK18142_3prime_partial:A_BomoSK_comp14085_c0_seq1 128bp	Bomo_Chr17
9047	O_BomoSK18143_5prime_partial:A_BomoSK_comp14085_c0_seq2 873bp	Bomo_Chr17		GO:0000166 F nucleotide binding GO:0000943 C retrotransposon nucleocapsid GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003723 F RNA binding GO:0003824 F catalytic activity GO:0003887 F DNA-directed DNA polymerase activity GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004523 F RNA-DNA hybrid ribonuclease activity GO:0004540 F ribonuclease activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006310 P DNA recombination GO:0006508 P proteolysis GO:0008152 P metabolic process GO:0008233 F peptidase activity GO:0008270 F zinc ion binding GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0019076 P viral release from host cell GO:0032197 P transposition, RNA-mediated GO:0046872 F metal ion binding GO:0071897 P DNA biosynthetic process GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9048	O_BomoSK18144_3prime_partial:A_BomoSK_comp14085_c0_seq2 128bp	Bomo_Chr17
9049	O_BomoSK18145_complete:A_BomoSK_comp14086_c0_seq1 1359bp	Bomo_Chr14		GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0014069 C postsynaptic density GO:0015030 C Cajal body GO:0016020 C membrane GO:0030054 C cell junction GO:0042995 C cell projection GO:0043197 C dendritic spine GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0046875 F ephrin receptor binding
9050	O_BomoSK18146_complete:A_BomoSK_comp14086_c0_seq1 148bp	Bomo_Chr14
9051	O_BomoSK18147_complete:A_BomoSK_comp14086_c0_seq1 119bp	Bomo_Chr14
9052	O_BomoSK18148_complete:A_BomoSK_comp14086_c0_seq2 1403bp	Bomo_Chr14		GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0014069 C postsynaptic density GO:0015030 C Cajal body GO:0016020 C membrane GO:0030054 C cell junction GO:0042995 C cell projection GO:0043197 C dendritic spine GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0046875 F ephrin receptor binding
9053	O_BomoSK18149_complete:A_BomoSK_comp14086_c0_seq2 148bp	Bomo_Chr14
9054	O_BomoSK1814_5prime_partial:A_BomoSK_comp4609_c0_seq1 171bp	Bomo_Scaf326	PREDICTED:_cadherin-23_[Bombyx_mori]
9055	O_BomoSK18150_complete:A_BomoSK_comp14086_c0_seq2 119bp	Bomo_Chr14
9056	O_BomoSK18151_complete:A_BomoSK_comp14086_c0_seq3 1341bp	Bomo_Chr14		GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0014069 C postsynaptic density GO:0015030 C Cajal body GO:0016020 C membrane GO:0030054 C cell junction GO:0042995 C cell projection GO:0043197 C dendritic spine GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0046875 F ephrin receptor binding
9057	O_BomoSK18152_complete:A_BomoSK_comp14086_c0_seq3 148bp	Bomo_Chr14
9058	O_BomoSK18153_complete:A_BomoSK_comp14086_c0_seq3 119bp	Bomo_Chr14
9059	O_BomoSK18154_5prime_partial:A_BomoSK_comp14086_c0_seq4 240bp	Bomo_Chr14
9060	O_BomoSK18155_complete:A_BomoSK_comp14086_c0_seq5 1385bp	Bomo_Chr14		GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0014069 C postsynaptic density GO:0015030 C Cajal body GO:0016020 C membrane GO:0030054 C cell junction GO:0042995 C cell projection GO:0043197 C dendritic spine GO:0045202 C synapse GO:0045211 C postsynaptic membrane GO:0046875 F ephrin receptor binding