SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/33939
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8731 O_BomoSK1785_complete:A_BomoSK_comp4583_c0_seq1
163bp
8732 O_BomoSK17860_3prime_partial:A_BomoSK_comp14058_c0_seq2
623bp
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
8733 O_BomoSK17861_3prime_partial:A_BomoSK_comp14058_c0_seq3
613bp
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
8734 O_BomoSK17862_3prime_partial:A_BomoSK_comp14058_c0_seq4
613bp
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
8735 O_BomoSK17863_3prime_partial:A_BomoSK_comp14058_c0_seq5
623bp
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
8736 O_BomoSK17864_complete:A_BomoSK_comp14059_c0_seq1
557bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8737 O_BomoSK17865_complete:A_BomoSK_comp14059_c0_seq1
139bp
8738 O_BomoSK17866_complete:A_BomoSK_comp14059_c0_seq1
127bp
8739 O_BomoSK17867_complete:A_BomoSK_comp14059_c0_seq1
110bp
8740 O_BomoSK17868_complete:A_BomoSK_comp14059_c0_seq2
558bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8741 O_BomoSK17869_complete:A_BomoSK_comp14059_c0_seq2
139bp
8742 O_BomoSK1786_complete:A_BomoSK_comp4583_c0_seq1
117bp
8743 O_BomoSK17870_complete:A_BomoSK_comp14059_c0_seq2
127bp
8744 O_BomoSK17871_complete:A_BomoSK_comp14059_c0_seq2
110bp
8745 O_BomoSK17872_complete:A_BomoSK_comp14059_c0_seq2
102bp
8746 O_BomoSK17873_complete:A_BomoSK_comp14059_c0_seq3
567bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8747 O_BomoSK17874_complete:A_BomoSK_comp14059_c0_seq3
190bp
8748 O_BomoSK17875_complete:A_BomoSK_comp14059_c0_seq3
137bp
8749 O_BomoSK17876_complete:A_BomoSK_comp14059_c0_seq3
110bp
8750 O_BomoSK17877_complete:A_BomoSK_comp14059_c0_seq3
102bp
8751 O_BomoSK17878_complete:A_BomoSK_comp14059_c0_seq4
568bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8752 O_BomoSK17879_complete:A_BomoSK_comp14059_c0_seq4
139bp
8753 O_BomoSK1787_complete:A_BomoSK_comp4583_c0_seq1
109bp
 PREDICTED:_tyrosinase_[Protobothrops_mucrosquamatus]
8754 O_BomoSK17880_complete:A_BomoSK_comp14059_c0_seq4
137bp
8755 O_BomoSK17881_complete:A_BomoSK_comp14059_c0_seq4
110bp
8756 O_BomoSK17882_complete:A_BomoSK_comp14059_c0_seq4
102bp
8757 O_BomoSK17883_complete:A_BomoSK_comp14059_c0_seq5
566bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8758 O_BomoSK17884_complete:A_BomoSK_comp14059_c0_seq5
190bp
8759 O_BomoSK17885_complete:A_BomoSK_comp14059_c0_seq5
137bp
8760 O_BomoSK17886_complete:A_BomoSK_comp14059_c0_seq5
110bp
previous next from show/33939

- SilkBase 1999-2023 -