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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8371 O_BomoSK17535_complete:A_BomoSK_comp14024_c0_seq45
821bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007338 P single fertilization
GO:0007369 P gastrulation
GO:0007506 P gonadal mesoderm development
GO:0008105 P protein localization
GO:0008406 P gonad development
GO:0009611 P response to wounding
GO:0009792 P embryo development ending in birth or egg hatching
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019904 F protein domain specific binding
GO:0030154 P cell differentiation
GO:0030864 C cortical actin cytoskeleton
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
8372 O_BomoSK17536_complete:A_BomoSK_comp14024_c0_seq45
122bp
8373 O_BomoSK17537_complete:A_BomoSK_comp14024_c0_seq46
892bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007338 P single fertilization
GO:0007369 P gastrulation
GO:0007506 P gonadal mesoderm development
GO:0008105 P protein localization
GO:0008406 P gonad development
GO:0009611 P response to wounding
GO:0009792 P embryo development ending in birth or egg hatching
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019904 F protein domain specific binding
GO:0030154 P cell differentiation
GO:0030864 C cortical actin cytoskeleton
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
8374 O_BomoSK17538_complete:A_BomoSK_comp14024_c0_seq46
122bp
8375 O_BomoSK17539_internal:A_BomoSK_comp14025_c0_seq1
352bp
8376 O_BomoSK1753_complete:A_BomoSK_comp4555_c0_seq2
482bp
 PREDICTED:_uncharacterized_protein_LOC106718589_[Papilio_machaon]
8377 O_BomoSK17540_complete:A_BomoSK_comp14026_c0_seq1
358bp
8378 O_BomoSK17541_complete:A_BomoSK_comp14026_c0_seq1
176bp
8379 O_BomoSK17542_complete:A_BomoSK_comp14026_c0_seq1
116bp
8380 O_BomoSK17543_complete:A_BomoSK_comp14026_c0_seq2
990bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
8381 O_BomoSK17544_complete:A_BomoSK_comp14026_c0_seq2
176bp
8382 O_BomoSK17545_complete:A_BomoSK_comp14026_c0_seq2
116bp
8383 O_BomoSK17546_5prime_partial:A_BomoSK_comp14026_c0_seq3
245bp
8384 O_BomoSK17547_5prime_partial:A_BomoSK_comp14026_c0_seq3
186bp
8385 O_BomoSK17548_complete:A_BomoSK_comp14026_c0_seq3
116bp
8386 O_BomoSK17549_complete:A_BomoSK_comp14026_c0_seq4
583bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
8387 O_BomoSK1754_internal:A_BomoSK_comp4556_c0_seq1
780bp
 PREDICTED:_nuclear_factor_related_to_kappa-B-binding_protein_isoform_X3_[Bombyx_mori]
GO:0002020 F protease binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0031011 C Ino80 complex
8388 O_BomoSK17550_complete:A_BomoSK_comp14026_c0_seq5
419bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
8389 O_BomoSK17551_5prime_partial:A_BomoSK_comp14027_c0_seq2
364bp
GO:0000139 C Golgi membrane
GO:0001537 F N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 P chondrocyte development
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008146 F sulfotransferase activity
GO:0009791 P post-embryonic development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030326 P embryonic limb morphogenesis
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 P polysaccharide localization
GO:0036342 P post-anal tail morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042733 P embryonic digit morphogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0047756 F chondroitin 4-sulfotransferase activity
GO:0048589 P developmental growth
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0048704 P embryonic skeletal system morphogenesis
GO:0050659 F N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 P cartilage development
8390 O_BomoSK17552_complete:A_BomoSK_comp14027_c0_seq3
105bp
GO:0000139 C Golgi membrane
GO:0001537 F N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 P chondrocyte development
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008146 F sulfotransferase activity
GO:0009791 P post-embryonic development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030326 P embryonic limb morphogenesis
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 P polysaccharide localization
GO:0036342 P post-anal tail morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042733 P embryonic digit morphogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0047756 F chondroitin 4-sulfotransferase activity
GO:0048589 P developmental growth
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0048704 P embryonic skeletal system morphogenesis
GO:0050659 F N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 P cartilage development
8391 O_BomoSK17553_complete:A_BomoSK_comp14028_c0_seq1
129bp
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0032542 F sulfiredoxin activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
8392 O_BomoSK17554_5prime_partial:A_BomoSK_comp14028_c0_seq3
107bp
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015074 P DNA integration
8393 O_BomoSK17555_internal:A_BomoSK_comp14029_c0_seq1
681bp
8394 O_BomoSK17556_complete:A_BomoSK_comp14029_c0_seq1
107bp
8395 O_BomoSK17557_complete:A_BomoSK_comp14029_c0_seq1
103bp
8396 O_BomoSK17558_complete:A_BomoSK_comp14030_c0_seq1
313bp
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
8397 O_BomoSK17559_complete:A_BomoSK_comp14030_c0_seq2
313bp
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
8398 O_BomoSK1755_complete:A_BomoSK_comp4556_c0_seq1
125bp
 metallophosphoesterase_[Nitrospirillum_amazonense]
8399 O_BomoSK17560_complete:A_BomoSK_comp14031_c0_seq1
384bp
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
8400 O_BomoSK17561_complete:A_BomoSK_comp14031_c0_seq2
384bp
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
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