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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8131 O_BomoSK17319_3prime_partial:A_BomoSK_comp14000_c0_seq1
196bp
GO:0000495 P box H/ACA RNA 3'-end processing
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007281 P germ cell development
GO:0009267 P cellular response to starvation
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0031429 C box H/ACA snoRNP complex
GO:0035220 P wing disc development
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
8132 O_BomoSK1731_complete:A_BomoSK_comp4537_c0_seq1
646bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0043547 P positive regulation of GTPase activity
8133 O_BomoSK17320_5prime_partial:A_BomoSK_comp14000_c1_seq1
323bp
GO:0000495 P box H/ACA RNA 3'-end processing
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007281 P germ cell development
GO:0009267 P cellular response to starvation
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0022008 P neurogenesis
GO:0030529 C ribonucleoprotein complex
GO:0031118 P rRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0031429 C box H/ACA snoRNP complex
GO:0035220 P wing disc development
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
8134 O_BomoSK17321_5prime_partial:A_BomoSK_comp14001_c0_seq1
190bp
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007444 P imaginal disc development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008270 F zinc ion binding
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0019899 F enzyme binding
GO:0033128 P negative regulation of histone phosphorylation
GO:0035075 P response to ecdysone
GO:0035209 P pupal development
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044212 F transcription cis-regulatory region binding
GO:0044665 C MLL1/2 complex
GO:0044666 C MLL3/4 complex
GO:0046872 F metal ion binding
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048188 C Set1C/COMPASS complex
GO:0048813 P dendrite morphogenesis
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
8135 O_BomoSK17322_5prime_partial:A_BomoSK_comp14001_c0_seq1
117bp
8136 O_BomoSK17323_internal:A_BomoSK_comp14002_c0_seq2
106bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8137 O_BomoSK17324_complete:A_BomoSK_comp14003_c0_seq1
342bp
8138 O_BomoSK17325_complete:A_BomoSK_comp14003_c0_seq1
223bp
8139 O_BomoSK17326_complete:A_BomoSK_comp14003_c0_seq3
229bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016556 P mRNA modification
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0050685 P positive regulation of mRNA processing
GO:0051726 P regulation of cell cycle
8140 O_BomoSK17327_complete:A_BomoSK_comp14003_c0_seq3
151bp
8141 O_BomoSK17328_complete:A_BomoSK_comp14003_c0_seq4
240bp
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
8142 O_BomoSK17329_complete:A_BomoSK_comp14003_c0_seq4
202bp
8143 O_BomoSK1732_complete:A_BomoSK_comp4537_c0_seq2
646bp
 PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0043547 P positive regulation of GTPase activity
8144 O_BomoSK17330_5prime_partial:A_BomoSK_comp14004_c0_seq1
195bp
8145 O_BomoSK17331_complete:A_BomoSK_comp14005_c1_seq2
218bp
GO:0000151 C ubiquitin ligase complex
GO:0000776 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0031647 P regulation of protein stability
GO:0043234 C protein-containing complex
GO:0043947 P obsolete positive regulation by host of symbiont catalytic activity
8146 O_BomoSK17332_5prime_partial:A_BomoSK_comp14005_c1_seq2
102bp
8147 O_BomoSK17333_complete:A_BomoSK_comp14007_c0_seq2
1240bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0007275 P multicellular organism development
GO:0007527 P adult somatic muscle development
GO:0007629 P flight behavior
GO:0010004 P gastrulation involving germ band extension
GO:0030036 P actin cytoskeleton organization
GO:0030239 P myofibril assembly
GO:0051014 P actin filament severing
8148 O_BomoSK17334_complete:A_BomoSK_comp14007_c0_seq2
112bp
8149 O_BomoSK17335_5prime_partial:A_BomoSK_comp14012_c1_seq1
240bp
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
8150 O_BomoSK17336_complete:A_BomoSK_comp14012_c1_seq2
1348bp
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
8151 O_BomoSK17337_complete:A_BomoSK_comp14012_c1_seq2
104bp
8152 O_BomoSK17338_5prime_partial:A_BomoSK_comp14012_c1_seq3
1527bp
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
8153 O_BomoSK17339_complete:A_BomoSK_comp14012_c1_seq3
104bp
8154 O_BomoSK1733_internal:A_BomoSK_comp4541_c0_seq1
152bp
 hypothetical_protein_RR46_09345_[Papilio_xuthus]
8155 O_BomoSK17340_complete:A_BomoSK_comp14012_c1_seq3
100bp
8156 O_BomoSK17341_3prime_partial:A_BomoSK_comp14013_c0_seq1
925bp
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
8157 O_BomoSK17342_complete:A_BomoSK_comp14013_c0_seq2
1800bp
GO:0004197 F cysteine-type endopeptidase activity
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0022416 P chaeta development
GO:0035071 P salivary gland cell autophagic cell death
GO:0035220 P wing disc development
GO:0045169 C fusome
GO:0048102 P autophagic cell death
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0098595 C perivitelline space
8158 O_BomoSK17343_3prime_partial:A_BomoSK_comp14014_c0_seq1
396bp
8159 O_BomoSK17344_3prime_partial:A_BomoSK_comp14014_c0_seq2
396bp
8160 O_BomoSK17345_3prime_partial:A_BomoSK_comp14014_c0_seq3
416bp
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