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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7921 O_BomoSK1712_internal:A_BomoSK_comp4520_c0_seq1
131bp
 PREDICTED:_uncharacterized_protein_LOC101737345_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0030132 C clathrin coat of coated pit
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
7922 O_BomoSK17130_complete:A_BomoSK_comp13969_c0_seq2
188bp
7923 O_BomoSK17131_complete:A_BomoSK_comp13969_c0_seq3
263bp
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0035914 P skeletal muscle cell differentiation
GO:0043565 F sequence-specific DNA binding
GO:0048511 P rhythmic process
7924 O_BomoSK17132_complete:A_BomoSK_comp13969_c0_seq3
188bp
7925 O_BomoSK17133_complete:A_BomoSK_comp13969_c0_seq4
276bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0035914 P skeletal muscle cell differentiation
GO:0043565 F sequence-specific DNA binding
GO:0048511 P rhythmic process
7926 O_BomoSK17134_complete:A_BomoSK_comp13969_c0_seq4
188bp
7927 O_BomoSK17135_complete:A_BomoSK_comp13971_c2_seq1
648bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0007405 P neuroblast proliferation
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0048471 C perinuclear region of cytoplasm
GO:0097431 C mitotic spindle pole
GO:1990023 C mitotic spindle midzone
7928 O_BomoSK17136_complete:A_BomoSK_comp13971_c2_seq1
187bp
7929 O_BomoSK17137_complete:A_BomoSK_comp13971_c2_seq1
177bp
7930 O_BomoSK17138_complete:A_BomoSK_comp13971_c2_seq1
150bp
7931 O_BomoSK17139_5prime_partial:A_BomoSK_comp13971_c2_seq2
220bp
GO:0003824 F catalytic activity
GO:0005102 F signaling receptor binding
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0008017 F microtubule binding
GO:0008022 F protein C-terminus binding
GO:0008152 P metabolic process
GO:0010968 P regulation of microtubule nucleation
GO:0015631 F tubulin binding
GO:0031115 P negative regulation of microtubule polymerization
GO:0072686 C mitotic spindle
7932 O_BomoSK1713_3prime_partial:A_BomoSK_comp4520_c0_seq2
119bp
 PREDICTED:_uncharacterized_protein_LOC101737345_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0030132 C clathrin coat of coated pit
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
7933 O_BomoSK17140_5prime_partial:A_BomoSK_comp13971_c2_seq2
111bp
7934 O_BomoSK17141_complete:A_BomoSK_comp13971_c2_seq3
875bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0007405 P neuroblast proliferation
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0048471 C perinuclear region of cytoplasm
GO:0097431 C mitotic spindle pole
GO:1990023 C mitotic spindle midzone
7935 O_BomoSK17142_complete:A_BomoSK_comp13971_c2_seq3
187bp
7936 O_BomoSK17143_complete:A_BomoSK_comp13971_c2_seq3
177bp
7937 O_BomoSK17144_complete:A_BomoSK_comp13971_c2_seq3
150bp
7938 O_BomoSK17145_complete:A_BomoSK_comp13971_c2_seq4
650bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0007405 P neuroblast proliferation
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0048471 C perinuclear region of cytoplasm
GO:0097431 C mitotic spindle pole
GO:1990023 C mitotic spindle midzone
7939 O_BomoSK17146_complete:A_BomoSK_comp13971_c2_seq4
187bp
7940 O_BomoSK17147_complete:A_BomoSK_comp13971_c2_seq4
177bp
7941 O_BomoSK17148_complete:A_BomoSK_comp13971_c2_seq4
150bp
7942 O_BomoSK17149_complete:A_BomoSK_comp13972_c0_seq1
301bp
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
7943 O_BomoSK1714_internal:A_BomoSK_comp4522_c0_seq1
513bp
 PREDICTED:_titin-like_isoform_X1_[Bombyx_mori]
7944 O_BomoSK17150_complete:A_BomoSK_comp13972_c0_seq2
301bp
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
7945 O_BomoSK17151_complete:A_BomoSK_comp13972_c0_seq2
141bp
GO:0000502 C proteasome complex
7946 O_BomoSK17152_5prime_partial:A_BomoSK_comp13972_c0_seq3
124bp
7947 O_BomoSK17153_complete:A_BomoSK_comp13973_c0_seq1
955bp
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0008021 C synaptic vesicle
GO:0008293 P torso signaling pathway
GO:0008333 P endosome to lysosome transport
GO:0008593 P regulation of Notch signaling pathway
GO:0016050 P vesicle organization
GO:0016079 P synaptic vesicle exocytosis
GO:0016082 P synaptic vesicle priming
GO:0016197 P endosomal transport
GO:0016322 P neuron remodeling
GO:0031398 P positive regulation of protein ubiquitination
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0033565 C ESCRT-0 complex
GO:0033619 P membrane protein proteolysis
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043130 F ubiquitin binding
GO:0045743 P positive regulation of fibroblast growth factor receptor signaling pathway
GO:0045752 P positive regulation of Toll signaling pathway
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051726 P regulation of cell cycle
GO:1990182 P exosomal secretion
GO:2000274 P regulation of epithelial cell migration, open tracheal system
7948 O_BomoSK17154_3prime_partial:A_BomoSK_comp13974_c0_seq1
409bp
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0008283 P cell population proliferation
GO:0010921 P regulation of phosphatase activity
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030262 P apoptotic nuclear changes
GO:0030332 F cyclin binding
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031398 P positive regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032403 F protein-containing complex binding
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044389 F ubiquitin-like protein ligase binding
GO:0044818 P mitotic G2/M transition checkpoint
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051019 F mitogen-activated protein kinase binding
GO:0051059 F NF-kappaB binding
GO:0071569 P protein ufmylation
GO:0071901 P negative regulation of protein serine/threonine kinase activity
GO:0097371 F MDM2/MDM4 family protein binding
GO:1900182 P positive regulation of protein localization to nucleus
GO:1901798 P positive regulation of signal transduction by p53 class mediator
GO:1903363 P negative regulation of cellular protein catabolic process
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
7949 O_BomoSK17155_3prime_partial:A_BomoSK_comp13975_c2_seq1
159bp
7950 O_BomoSK17156_complete:A_BomoSK_comp13975_c2_seq1
146bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0071011 C precatalytic spliceosome
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