Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
781	O_BomoSK10703_5prime_partial:A_BomoSK_comp12320_c0_seq2 109bp	Bomo_Chr16
782	O_BomoSK10704_5prime_partial:A_BomoSK_comp12320_c0_seq3 109bp	Bomo_Chr16
783	O_BomoSK10705_3prime_partial:A_BomoSK_comp12320_c0_seq4 116bp	Bomo_Chr16	hypothetical_protein_KGM_14412_[Danaus_plexippus]
784	O_BomoSK10706_5prime_partial:A_BomoSK_comp12320_c0_seq4 109bp	Bomo_Chr16
785	O_BomoSK10707_5prime_partial:A_BomoSK_comp12321_c0_seq1 138bp	Bomo_Chr11	PREDICTED:_ATP_synthase_subunit_s,_mitochondrial_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006754 P ATP biosynthetic process GO:0006810 P transport GO:0006811 P ion transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o) GO:0046872 F metal ion binding
786	O_BomoSK10708_5prime_partial:A_BomoSK_comp12321_c0_seq2 232bp	Bomo_Chr11	PREDICTED:_ATP_synthase_subunit_s,_mitochondrial_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006754 P ATP biosynthetic process GO:0006810 P transport GO:0006811 P ion transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o) GO:0046872 F metal ion binding
787	O_BomoSK10709_complete:A_BomoSK_comp12324_c0_seq1 149bp	Bomo_Chr12	PREDICTED:_male-enhanced_antigen_1_[Amyelois_transitella]	GO:0007275 P multicellular organism development GO:0007283 P spermatogenesis GO:0030154 P cell differentiation
788	O_BomoSK1070_5prime_partial:A_BomoSK_comp3858_c0_seq1 140bp	Bomo_Chr27	PREDICTED:_protein_MON2_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0006810 P transport GO:0008150 P biological_process GO:0015031 P protein transport
789	O_BomoSK10710_complete:A_BomoSK_comp12325_c0_seq1 729bp	Bomo_Chr20	PREDICTED:_zinc_finger_protein_585A-like_[Amyelois_transitella]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
790	O_BomoSK10711_complete:A_BomoSK_comp12325_c0_seq1 104bp	Bomo_Chr20	PREDICTED:_lysophospholipid_acyltransferase_LPEAT1_isoform_X2_[Oryza_sativa_Japonica_Group]
791	O_BomoSK10712_complete:A_BomoSK_comp12325_c0_seq2 729bp	Bomo_Chr20	PREDICTED:_zinc_finger_protein_585A-like_[Amyelois_transitella]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
792	O_BomoSK10713_complete:A_BomoSK_comp12325_c0_seq2 104bp	Bomo_Chr20	PREDICTED:_lysophospholipid_acyltransferase_LPEAT1_isoform_X2_[Oryza_sativa_Japonica_Group]
793	O_BomoSK10714_complete:A_BomoSK_comp12326_c0_seq1 230bp	Bomo_Chr23	PREDICTED:_probable_methylthioribulose-1-phosphate_dehydratase_[Amyelois_transitella]	GO:0005737 C cytoplasm GO:0008270 F zinc ion binding GO:0008652 P cellular amino acid biosynthetic process GO:0009086 P methionine biosynthetic process GO:0016829 F lyase activity GO:0019284 P L-methionine salvage from S-adenosylmethionine GO:0019509 P L-methionine salvage from methylthioadenosine GO:0046570 F methylthioribulose 1-phosphate dehydratase activity GO:0046872 F metal ion binding
794	O_BomoSK10715_complete:A_BomoSK_comp12327_c0_seq1 416bp	Bomo_Chr24	hypothetical_protein_RR46_03053_[Papilio_xuthus]	GO:0005737 C cytoplasm GO:0016567 P protein ubiquitination GO:0016874 F ligase activity
795	O_BomoSK10716_5prime_partial:A_BomoSK_comp12327_c0_seq1 334bp	Bomo_Chr24	PREDICTED:_m7GpppX_diphosphatase_[Papilio_polytes]	GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA GO:0000340 F RNA 7-methylguanosine cap binding GO:0003824 F catalytic activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016787 F hydrolase activity GO:0036245 P cellular response to menadione GO:0043069 P negative regulation of programmed cell death GO:0045292 P mRNA cis splicing, via spliceosome GO:0050072 F m7G(5')pppN diphosphatase activity
796	O_BomoSK10717_5prime_partial:A_BomoSK_comp12327_c1_seq1 401bp	Bomo_Chr13	PREDICTED:_gem-associated_protein_5-like_[Bombyx_mori]	GO:0000387 P spliceosomal snRNP assembly GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016020 C membrane GO:0016604 C nuclear body GO:0017069 F snRNA binding GO:0032797 C SMN complex GO:0034719 C SMN-Sm protein complex GO:0044822 F RNA binding
797	O_BomoSK10718_complete:A_BomoSK_comp12328_c0_seq1 127bp	Bomo_Chr19	hypothetical_protein_SOVF_038900_isoform_A_[Spinacia_oleracea]
798	O_BomoSK10719_complete:A_BomoSK_comp12329_c0_seq1 366bp	Bomo_Chr10	polymerase_delta_interacting_protein_3_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000346 C transcription export complex GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006369 P termination of RNA polymerase II transcription GO:0006405 P RNA export from nucleus GO:0006406 P mRNA export from nucleus GO:0006417 P regulation of translation GO:0006810 P transport GO:0016607 C nuclear speck GO:0016973 P poly(A)+ mRNA export from nucleus GO:0031124 P mRNA 3'-end processing GO:0035145 C exon-exon junction complex GO:0043231 C intracellular membrane-bounded organelle GO:0044822 F RNA binding GO:0045727 P positive regulation of translation GO:0051028 P mRNA transport
799	O_BomoSK1071_complete:A_BomoSK_comp3859_c0_seq1 234bp	Bomo_Chr2	PREDICTED:_KAT8_regulatory_NSL_complex_subunit_2_isoform_X2_[Papilio_xuthus]	GO:0000123 C histone acetyltransferase complex GO:0005634 C nucleus GO:0016568 P chromatin organization GO:0043981 P histone H4-K5 acetylation GO:0043982 P histone H4-K8 acetylation GO:0043984 P histone H4-K16 acetylation GO:0043995 F histone acetyltransferase activity (H4-K5 specific) GO:0043996 F histone acetyltransferase activity (H4-K8 specific) GO:0044545 C NSL complex GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
800	O_BomoSK10720_complete:A_BomoSK_comp12329_c0_seq2 340bp	Bomo_Chr10	polymerase_delta_interacting_protein_3_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000346 C transcription export complex GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006369 P termination of RNA polymerase II transcription GO:0006405 P RNA export from nucleus GO:0006406 P mRNA export from nucleus GO:0006417 P regulation of translation GO:0006810 P transport GO:0016607 C nuclear speck GO:0016973 P poly(A)+ mRNA export from nucleus GO:0031124 P mRNA 3'-end processing GO:0035145 C exon-exon junction complex GO:0043231 C intracellular membrane-bounded organelle GO:0044822 F RNA binding GO:0045727 P positive regulation of translation GO:0051028 P mRNA transport
801	O_BomoSK10721_complete:A_BomoSK_comp12331_c0_seq1 222bp	Bomo_Chr10	Uncharacterized_protein_OBRU01_09759_[Operophtera_brumata]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0016020 C membrane
802	O_BomoSK10722_complete:A_BomoSK_comp12331_c0_seq2 229bp	Bomo_Chr10	Uncharacterized_protein_OBRU01_09759_[Operophtera_brumata]	GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0016020 C membrane
803	O_BomoSK10723_internal:A_BomoSK_comp12333_c1_seq1 118bp	Bomo_Chr6	Zinc_finger_MYM-type_protein_1,_partial_[Stegodyphus_mimosarum]
804	O_BomoSK10724_3prime_partial:A_BomoSK_comp12334_c0_seq1 330bp	Bomo_Chr1	PREDICTED:_prostaglandin_E_synthase_2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0001516 P prostaglandin biosynthetic process GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0006633 P fatty acid biosynthetic process GO:0006693 P prostaglandin metabolic process GO:0009055 F electron transfer activity GO:0015035 F protein-disulfide reductase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016829 F lyase activity GO:0016853 F isomerase activity GO:0020037 F heme binding GO:0043295 F glutathione binding GO:0045454 P cell redox homeostasis GO:0048471 C perinuclear region of cytoplasm GO:0050220 F prostaglandin-E synthase activity GO:0055114 P obsolete oxidation-reduction process
805	O_BomoSK10725_complete:A_BomoSK_comp12334_c0_seq2 388bp	Bomo_Chr1	PREDICTED:_prostaglandin_E_synthase_2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0001516 P prostaglandin biosynthetic process GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0006633 P fatty acid biosynthetic process GO:0006693 P prostaglandin metabolic process GO:0009055 F electron transfer activity GO:0015035 F protein-disulfide reductase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016829 F lyase activity GO:0016853 F isomerase activity GO:0020037 F heme binding GO:0043295 F glutathione binding GO:0045454 P cell redox homeostasis GO:0048471 C perinuclear region of cytoplasm GO:0050220 F prostaglandin-E synthase activity GO:0055114 P obsolete oxidation-reduction process
806	O_BomoSK10726_5prime_partial:A_BomoSK_comp12335_c0_seq2 164bp	Bomo_Chr24	PREDICTED:_dynamin-like_120_kDa_protein,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005758 C mitochondrial intermembrane space GO:0006915 P apoptotic process GO:0007005 P mitochondrion organization GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0043009 P chordate embryonic development GO:0070584 P mitochondrion morphogenesis
807	O_BomoSK10727_5prime_partial:A_BomoSK_comp12335_c0_seq2 119bp	Bomo_Chr24
808	O_BomoSK10728_5prime_partial:A_BomoSK_comp12336_c0_seq1 167bp	Bomo_Scaf082	PREDICTED:_adapter_molecule_Crk_[Papilio_machaon]	GO:0005070 F obsolete SH3/SH2 adaptor activity GO:0005515 F protein binding GO:0006911 P phagocytosis, engulfment GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0007298 P border follicle cell migration GO:0007520 P myoblast fusion GO:0032956 P regulation of actin cytoskeleton organization GO:0043087 P regulation of GTPase activity GO:0046330 P positive regulation of JNK cascade GO:0046529 P imaginal disc fusion, thorax closure GO:0048013 P ephrin receptor signaling pathway
809	O_BomoSK10729_complete:A_BomoSK_comp12336_c0_seq1 163bp	Bomo_Scaf082	hypothetical_protein_[Actinomycetospora_chiangmaiensis]
810	O_BomoSK1072_5prime_partial:A_BomoSK_comp3859_c0_seq2 335bp	Bomo_Chr2	PREDICTED:_KAT8_regulatory_NSL_complex_subunit_2_isoform_X2_[Papilio_xuthus]	GO:0000123 C histone acetyltransferase complex GO:0005634 C nucleus GO:0016568 P chromatin organization GO:0043981 P histone H4-K5 acetylation GO:0043982 P histone H4-K8 acetylation GO:0043984 P histone H4-K16 acetylation GO:0043995 F histone acetyltransferase activity (H4-K5 specific) GO:0043996 F histone acetyltransferase activity (H4-K8 specific) GO:0044545 C NSL complex GO:0046972 F histone acetyltransferase activity (H4-K16 specific)