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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7741 O_BomoSK16969_complete:A_BomoSK_comp13955_c0_seq1
256bp
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0034477 P U6 snRNA 3'-end processing
GO:0045171 C intercellular bridge
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
7742 O_BomoSK1696_complete:A_BomoSK_comp4513_c0_seq2
139bp
 amino_acid_ABC_transporter_permease_[Paracoccus_sanguinis]
7743 O_BomoSK16970_complete:A_BomoSK_comp13955_c0_seq1
105bp
7744 O_BomoSK16971_complete:A_BomoSK_comp13955_c0_seq2
506bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0009898 C cytoplasmic side of plasma membrane
GO:0012505 C endomembrane system
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0042593 P glucose homeostasis
GO:0043231 C intracellular membrane-bounded organelle
GO:0046324 P regulation of glucose import
GO:0048471 C perinuclear region of cytoplasm
GO:0061024 P membrane organization
7745 O_BomoSK16972_complete:A_BomoSK_comp13955_c0_seq2
405bp
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0010793 P regulation of mRNA export from nucleus
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
7746 O_BomoSK16973_complete:A_BomoSK_comp13955_c0_seq2
105bp
7747 O_BomoSK16974_complete:A_BomoSK_comp13957_c0_seq1
669bp
GO:0003824 F catalytic activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0006650 P glycerophospholipid metabolic process
GO:0007416 P synapse assembly
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008374 F O-acyltransferase activity
GO:0008611 P ether lipid biosynthetic process
GO:0016020 C membrane
GO:0016287 F glycerone-phosphate O-acyltransferase activity
GO:0016290 F palmitoyl-CoA hydrolase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0021587 P cerebellum morphogenesis
GO:0030913 P paranodal junction assembly
GO:0042493 P response to xenobiotic stimulus
GO:0042552 P myelination
GO:0042594 P response to starvation
GO:0044255 P cellular lipid metabolic process
GO:0061024 P membrane organization
GO:0070542 P response to fatty acid
7748 O_BomoSK16975_complete:A_BomoSK_comp13957_c0_seq1
166bp
7749 O_BomoSK16976_internal:A_BomoSK_comp13958_c0_seq1
141bp
7750 O_BomoSK16977_internal:A_BomoSK_comp13958_c0_seq1
140bp
7751 O_BomoSK16978_complete:A_BomoSK_comp13958_c1_seq1
647bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7752 O_BomoSK16979_complete:A_BomoSK_comp13958_c1_seq1
166bp
7753 O_BomoSK1697_internal:A_BomoSK_comp4514_c0_seq1
2374bp
 PREDICTED:_laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
7754 O_BomoSK16980_5prime_partial:A_BomoSK_comp13958_c2_seq1
130bp
7755 O_BomoSK16981_complete:A_BomoSK_comp13958_c2_seq2
294bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003934 F GTP cyclohydrolase I activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006728 P pteridine biosynthetic process
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0008363 P larval chitin-based cuticle development
GO:0009880 P embryonic pattern specification
GO:0016787 F hydrolase activity
GO:0035185 P preblastoderm mitotic cell cycle
GO:0035998 P 7,8-dihydroneopterin 3'-triphosphate biosynthetic process
GO:0043095 P regulation of GTP cyclohydrolase I activity
GO:0046654 P tetrahydrofolate biosynthetic process
GO:0046872 F metal ion binding
GO:0048067 P cuticle pigmentation
GO:0048072 P compound eye pigmentation
GO:0060308 F GTP cyclohydrolase I regulator activity
GO:2000274 P regulation of epithelial cell migration, open tracheal system
7756 O_BomoSK16982_complete:A_BomoSK_comp13958_c2_seq2
133bp
7757 O_BomoSK16983_complete:A_BomoSK_comp13958_c2_seq2
106bp
7758 O_BomoSK16984_3prime_partial:A_BomoSK_comp13958_c2_seq3
220bp
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003674 F molecular_function
GO:0005201 F extracellular matrix structural constituent
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
7759 O_BomoSK16985_complete:A_BomoSK_comp13958_c2_seq3
142bp
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0016020 C membrane
7760 O_BomoSK16986_internal:A_BomoSK_comp13958_c2_seq5
169bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7761 O_BomoSK16987_5prime_partial:A_BomoSK_comp13958_c2_seq5
130bp
7762 O_BomoSK16988_complete:A_BomoSK_comp13958_c2_seq6
182bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003934 F GTP cyclohydrolase I activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006728 P pteridine biosynthetic process
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0008363 P larval chitin-based cuticle development
GO:0009880 P embryonic pattern specification
GO:0016787 F hydrolase activity
GO:0035185 P preblastoderm mitotic cell cycle
GO:0035998 P 7,8-dihydroneopterin 3'-triphosphate biosynthetic process
GO:0043095 P regulation of GTP cyclohydrolase I activity
GO:0046654 P tetrahydrofolate biosynthetic process
GO:0046872 F metal ion binding
GO:0048067 P cuticle pigmentation
GO:0048072 P compound eye pigmentation
GO:0060308 F GTP cyclohydrolase I regulator activity
GO:2000274 P regulation of epithelial cell migration, open tracheal system
7763 O_BomoSK16989_complete:A_BomoSK_comp13958_c2_seq6
133bp
7764 O_BomoSK1698_5prime_partial:A_BomoSK_comp4514_c0_seq1
235bp
7765 O_BomoSK16990_5prime_partial:A_BomoSK_comp13958_c2_seq7
183bp
GO:0009986 C cell surface
7766 O_BomoSK16991_3prime_partial:A_BomoSK_comp13958_c2_seq7
146bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005581 C collagen trimer
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7767 O_BomoSK16992_5prime_partial:A_BomoSK_comp13958_c2_seq8
270bp
GO:0005576 C extracellular region
GO:0005618 C cell wall
GO:0016020 C membrane
7768 O_BomoSK16993_3prime_partial:A_BomoSK_comp13958_c2_seq8
179bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005581 C collagen trimer
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7769 O_BomoSK16994_3prime_partial:A_BomoSK_comp13958_c2_seq9
312bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005581 C collagen trimer
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7770 O_BomoSK16995_5prime_partial:A_BomoSK_comp13958_c2_seq9
269bp
GO:0009986 C cell surface
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