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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7561 O_BomoSK16806_complete:A_BomoSK_comp13934_c1_seq11
128bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0032588 C trans-Golgi network membrane
7562 O_BomoSK16807_complete:A_BomoSK_comp13934_c1_seq11
122bp
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
7563 O_BomoSK16808_3prime_partial:A_BomoSK_comp13934_c1_seq12
155bp
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
7564 O_BomoSK16809_complete:A_BomoSK_comp13935_c0_seq2
391bp
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
7565 O_BomoSK1680_complete:A_BomoSK_comp4495_c0_seq1
108bp
 tRNA(Ile)-lysidine_synthase_[Shewanella_sp._cp20]
7566 O_BomoSK16810_complete:A_BomoSK_comp13935_c0_seq2
221bp
7567 O_BomoSK16811_complete:A_BomoSK_comp13935_c0_seq2
103bp
7568 O_BomoSK16812_3prime_partial:A_BomoSK_comp13936_c0_seq1
490bp
GO:0003677 F DNA binding
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
7569 O_BomoSK16813_5prime_partial:A_BomoSK_comp13936_c0_seq1
172bp
7570 O_BomoSK16814_complete:A_BomoSK_comp13936_c0_seq1
120bp
7571 O_BomoSK16815_complete:A_BomoSK_comp13936_c0_seq1
101bp
7572 O_BomoSK16816_3prime_partial:A_BomoSK_comp13936_c0_seq3
490bp
GO:0003677 F DNA binding
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
7573 O_BomoSK16817_5prime_partial:A_BomoSK_comp13936_c0_seq3
172bp
7574 O_BomoSK16818_complete:A_BomoSK_comp13936_c0_seq3
120bp
7575 O_BomoSK16819_3prime_partial:A_BomoSK_comp13936_c0_seq4
185bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0046872 F metal ion binding
7576 O_BomoSK1681_complete:A_BomoSK_comp4495_c0_seq1
103bp
 PREDICTED:_carbonic_anhydrase_4-like_[Chlamydotis_macqueenii]
7577 O_BomoSK16820_5prime_partial:A_BomoSK_comp13936_c0_seq4
172bp
7578 O_BomoSK16821_internal:A_BomoSK_comp13937_c0_seq1
2247bp
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009888 P tissue development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032880 P regulation of protein localization
GO:0035159 P regulation of tube length, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0035329 P hippo signaling
GO:0040008 P regulation of growth
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0045570 P regulation of imaginal disc growth
GO:0045571 P negative regulation of imaginal disc growth
GO:0045926 P negative regulation of growth
GO:0046620 P regulation of organ growth
GO:0048105 P establishment of body hair planar orientation
GO:0050839 F cell adhesion molecule binding
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
7579 O_BomoSK16822_5prime_partial:A_BomoSK_comp13937_c1_seq1
2716bp
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007164 P establishment of tissue polarity
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009888 P tissue development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016324 C apical plasma membrane
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0018149 P peptide cross-linking
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032880 P regulation of protein localization
GO:0035159 P regulation of tube length, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0035329 P hippo signaling
GO:0040008 P regulation of growth
GO:0042067 P establishment of ommatidial planar polarity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045296 F cadherin binding
GO:0045317 P equator specification
GO:0045570 P regulation of imaginal disc growth
GO:0045571 P negative regulation of imaginal disc growth
GO:0045926 P negative regulation of growth
GO:0046620 P regulation of organ growth
GO:0048105 P establishment of body hair planar orientation
GO:0050839 F cell adhesion molecule binding
GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
7580 O_BomoSK16823_complete:A_BomoSK_comp13937_c1_seq1
156bp
7581 O_BomoSK16824_complete:A_BomoSK_comp13937_c1_seq1
114bp
7582 O_BomoSK16825_complete:A_BomoSK_comp13937_c1_seq1
112bp
7583 O_BomoSK16826_complete:A_BomoSK_comp13937_c1_seq1
107bp
7584 O_BomoSK16827_complete:A_BomoSK_comp13938_c0_seq1
618bp
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0010107 P potassium ion import across plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031224 C intrinsic component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051289 P protein homotetramerization
7585 O_BomoSK16828_complete:A_BomoSK_comp13938_c0_seq2
540bp
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0010107 P potassium ion import across plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031224 C intrinsic component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051289 P protein homotetramerization
7586 O_BomoSK16829_complete:A_BomoSK_comp13938_c0_seq3
524bp
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0010107 P potassium ion import across plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031224 C intrinsic component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051289 P protein homotetramerization
7587 O_BomoSK1682_internal:A_BomoSK_comp4496_c0_seq1
320bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045121 C membrane raft
7588 O_BomoSK16830_complete:A_BomoSK_comp13938_c0_seq6
634bp
GO:0005242 F inward rectifier potassium channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0010107 P potassium ion import across plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031224 C intrinsic component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051289 P protein homotetramerization
7589 O_BomoSK16831_complete:A_BomoSK_comp13939_c0_seq1
351bp
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
7590 O_BomoSK16832_complete:A_BomoSK_comp13939_c0_seq1
150bp
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