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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7261 O_BomoSK16536_complete:A_BomoSK_comp13878_c0_seq3
107bp
7262 O_BomoSK16537_5prime_partial:A_BomoSK_comp13880_c0_seq1
101bp
7263 O_BomoSK16538_5prime_partial:A_BomoSK_comp13880_c0_seq2
101bp
7264 O_BomoSK16539_complete:A_BomoSK_comp13881_c0_seq2
122bp
7265 O_BomoSK1653_complete:A_BomoSK_comp4467_c0_seq1
249bp
 microtubule-associated_protein_1_light_chain_3_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031090 C organelle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
7266 O_BomoSK16540_complete:A_BomoSK_comp13881_c0_seq3
488bp
7267 O_BomoSK16541_complete:A_BomoSK_comp13881_c0_seq3
122bp
7268 O_BomoSK16542_5prime_partial:A_BomoSK_comp13882_c0_seq1
454bp
7269 O_BomoSK16543_complete:A_BomoSK_comp13882_c0_seq1
200bp
7270 O_BomoSK16544_internal:A_BomoSK_comp13882_c1_seq1
1449bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0051028 P mRNA transport
7271 O_BomoSK16545_complete:A_BomoSK_comp13882_c1_seq1
243bp
7272 O_BomoSK16546_complete:A_BomoSK_comp13882_c1_seq1
143bp
7273 O_BomoSK16547_complete:A_BomoSK_comp13882_c1_seq1
121bp
7274 O_BomoSK16548_complete:A_BomoSK_comp13882_c1_seq1
117bp
7275 O_BomoSK16549_complete:A_BomoSK_comp13883_c0_seq1
329bp
GO:0002020 F protease binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0016922 F nuclear receptor binding
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0035035 F histone acetyltransferase binding
GO:0044389 F ubiquitin-like protein ligase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1901998 P toxin transport
7276 O_BomoSK1654_3prime_partial:A_BomoSK_comp4467_c0_seq2
104bp
 PREDICTED:_uncharacterized_protein_LOC101746017_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031090 C organelle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
7277 O_BomoSK16550_complete:A_BomoSK_comp13883_c0_seq1
156bp
7278 O_BomoSK16551_complete:A_BomoSK_comp13883_c0_seq2
108bp
7279 O_BomoSK16552_complete:A_BomoSK_comp13883_c0_seq3
512bp
GO:0002020 F protease binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0016922 F nuclear receptor binding
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0035035 F histone acetyltransferase binding
GO:0044389 F ubiquitin-like protein ligase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1901998 P toxin transport
7280 O_BomoSK16553_complete:A_BomoSK_comp13883_c0_seq3
156bp
7281 O_BomoSK16554_complete:A_BomoSK_comp13885_c0_seq1
196bp
GO:0005496 F steroid binding
GO:0008289 F lipid binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
7282 O_BomoSK16555_complete:A_BomoSK_comp13886_c0_seq1
283bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005789 C endoplasmic reticulum membrane
GO:0006470 P protein dephosphorylation
GO:0006998 P nuclear envelope organization
GO:0007474 P imaginal disc-derived wing vein specification
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030514 P negative regulation of BMP signaling pathway
GO:0031965 C nuclear membrane
GO:0071595 C Nem1-Spo7 phosphatase complex
7283 O_BomoSK16556_complete:A_BomoSK_comp13886_c0_seq2
245bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005789 C endoplasmic reticulum membrane
GO:0006470 P protein dephosphorylation
GO:0006998 P nuclear envelope organization
GO:0007474 P imaginal disc-derived wing vein specification
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030514 P negative regulation of BMP signaling pathway
GO:0031965 C nuclear membrane
GO:0071595 C Nem1-Spo7 phosphatase complex
7284 O_BomoSK16557_5prime_partial:A_BomoSK_comp13887_c0_seq2
520bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
7285 O_BomoSK16558_3prime_partial:A_BomoSK_comp13887_c0_seq2
404bp
7286 O_BomoSK16559_5prime_partial:A_BomoSK_comp13887_c0_seq3
549bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
7287 O_BomoSK1655_complete:A_BomoSK_comp4468_c0_seq1
634bp
 PREDICTED:_large_subunit_GTPase_1_homolog_[Amyelois_transitella]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0009267 P cellular response to starvation
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016787 F hydrolase activity
GO:0040008 P regulation of growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0051168 P nuclear export
7288 O_BomoSK16560_3prime_partial:A_BomoSK_comp13887_c0_seq3
404bp
7289 O_BomoSK16561_internal:A_BomoSK_comp13888_c0_seq1
310bp
7290 O_BomoSK16562_internal:A_BomoSK_comp13888_c0_seq2
305bp
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