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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6721 O_BomoSK1604_complete:A_BomoSK_comp4402_c0_seq1
133bp
6722 O_BomoSK16050_complete:A_BomoSK_comp13802_c0_seq5
123bp
6723 O_BomoSK16051_complete:A_BomoSK_comp13802_c0_seq5
104bp
6724 O_BomoSK16052_complete:A_BomoSK_comp13802_c0_seq6
259bp
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
6725 O_BomoSK16053_complete:A_BomoSK_comp13802_c0_seq6
171bp
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
6726 O_BomoSK16054_complete:A_BomoSK_comp13802_c0_seq6
123bp
6727 O_BomoSK16055_complete:A_BomoSK_comp13802_c0_seq6
104bp
6728 O_BomoSK16056_complete:A_BomoSK_comp13802_c0_seq7
259bp
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
6729 O_BomoSK16057_complete:A_BomoSK_comp13802_c0_seq7
123bp
6730 O_BomoSK16058_complete:A_BomoSK_comp13802_c1_seq1
117bp
6731 O_BomoSK16059_complete:A_BomoSK_comp13802_c1_seq2
507bp
GO:0000166 F nucleotide binding
GO:0003972 F RNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008452 F RNA ligase activity
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0072669 C tRNA-splicing ligase complex
GO:2000237 P positive regulation of tRNA processing
6732 O_BomoSK1605_3prime_partial:A_BomoSK_comp4406_c0_seq1
532bp
 PREDICTED:_formin-like_protein_CG32138_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005575 C cellular_component
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0048812 P neuron projection morphogenesis
6733 O_BomoSK16060_complete:A_BomoSK_comp13803_c0_seq1
120bp
6734 O_BomoSK16061_complete:A_BomoSK_comp13803_c0_seq2
621bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
6735 O_BomoSK16062_complete:A_BomoSK_comp13803_c0_seq2
134bp
6736 O_BomoSK16063_complete:A_BomoSK_comp13803_c0_seq3
463bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009299 P mRNA transcription
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019899 F enzyme binding
GO:0030331 F estrogen receptor binding
GO:0030529 C ribonucleoprotein complex
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0036002 F pre-mRNA binding
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044822 F RNA binding
GO:0045069 P regulation of viral genome replication
GO:0045667 P regulation of osteoblast differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048306 F calcium-dependent protein binding
GO:0048511 P rhythmic process
GO:0050681 F androgen receptor binding
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:2001014 P regulation of skeletal muscle cell differentiation
6737 O_BomoSK16064_complete:A_BomoSK_comp13803_c0_seq3
134bp
6738 O_BomoSK16065_complete:A_BomoSK_comp13803_c0_seq4
120bp
6739 O_BomoSK16066_complete:A_BomoSK_comp13803_c0_seq5
460bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009299 P mRNA transcription
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019899 F enzyme binding
GO:0030331 F estrogen receptor binding
GO:0030529 C ribonucleoprotein complex
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0036002 F pre-mRNA binding
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0044822 F RNA binding
GO:0045069 P regulation of viral genome replication
GO:0045667 P regulation of osteoblast differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048306 F calcium-dependent protein binding
GO:0048511 P rhythmic process
GO:0050681 F androgen receptor binding
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:2001014 P regulation of skeletal muscle cell differentiation
6740 O_BomoSK16067_complete:A_BomoSK_comp13803_c0_seq5
134bp
6741 O_BomoSK16068_3prime_partial:A_BomoSK_comp13804_c0_seq1
875bp
6742 O_BomoSK16069_complete:A_BomoSK_comp13804_c0_seq1
167bp
6743 O_BomoSK1606_complete:A_BomoSK_comp4406_c0_seq1
114bp
6744 O_BomoSK16070_complete:A_BomoSK_comp13804_c0_seq1
104bp
6745 O_BomoSK16071_internal:A_BomoSK_comp13804_c1_seq1
384bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
6746 O_BomoSK16072_5prime_partial:A_BomoSK_comp13804_c1_seq3
356bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
6747 O_BomoSK16073_5prime_partial:A_BomoSK_comp13804_c1_seq4
441bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
6748 O_BomoSK16074_5prime_partial:A_BomoSK_comp13804_c1_seq6
359bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
6749 O_BomoSK16075_5prime_partial:A_BomoSK_comp13805_c0_seq1
149bp
GO:0000790 C chromatin
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006334 P nucleosome assembly
GO:0006335 P DNA replication-dependent chromatin assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0008584 P male gonad development
GO:0015031 P protein transport
GO:0032403 F protein-containing complex binding
GO:0033574 P response to testosterone
GO:0043234 C protein-containing complex
GO:0043486 P histone exchange
GO:0051879 F Hsp90 protein binding
6750 O_BomoSK16076_5prime_partial:A_BomoSK_comp13805_c0_seq2
178bp
GO:0005634 C nucleus
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