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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6121 O_BomoSK1550_complete:A_BomoSK_comp4357_c0_seq2
1838bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_FAM135A_[Bombyx_mori]
6122 O_BomoSK15510_complete:A_BomoSK_comp13710_c1_seq3
155bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X3_[Condylura_cristata]
6123 O_BomoSK15511_complete:A_BomoSK_comp13710_c1_seq3
140bp
 AAEL007338-PA_[Aedes_aegypti]
6124 O_BomoSK15512_complete:A_BomoSK_comp13710_c1_seq3
101bp
6125 O_BomoSK15513_complete:A_BomoSK_comp13710_c1_seq4
330bp
 PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6126 O_BomoSK15514_complete:A_BomoSK_comp13710_c1_seq4
140bp
 AAEL007338-PA_[Aedes_aegypti]
6127 O_BomoSK15515_complete:A_BomoSK_comp13710_c1_seq4
108bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X2_[Condylura_cristata]
6128 O_BomoSK15516_complete:A_BomoSK_comp13710_c1_seq4
101bp
6129 O_BomoSK15517_complete:A_BomoSK_comp13710_c1_seq6
345bp
 PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6130 O_BomoSK15518_complete:A_BomoSK_comp13710_c1_seq6
140bp
 AAEL007338-PA_[Aedes_aegypti]
6131 O_BomoSK15519_complete:A_BomoSK_comp13710_c1_seq6
108bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X2_[Condylura_cristata]
6132 O_BomoSK1551_complete:A_BomoSK_comp4358_c0_seq1
522bp
 DNA_polymerase_epsilon_subunit_2_[Papilio_xuthus]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000722 P telomere maintenance via recombination
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006270 P DNA replication initiation
GO:0006281 P DNA repair
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042276 P error-prone translesion synthesis
GO:0043231 C intracellular membrane-bounded organelle
6133 O_BomoSK15520_complete:A_BomoSK_comp13710_c1_seq6
101bp
6134 O_BomoSK15521_complete:A_BomoSK_comp13710_c1_seq7
330bp
 PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6135 O_BomoSK15522_complete:A_BomoSK_comp13710_c1_seq7
140bp
 AAEL007338-PA_[Aedes_aegypti]
6136 O_BomoSK15523_complete:A_BomoSK_comp13710_c1_seq7
108bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X2_[Condylura_cristata]
6137 O_BomoSK15524_complete:A_BomoSK_comp13710_c1_seq7
101bp
6138 O_BomoSK15525_complete:A_BomoSK_comp13710_c1_seq8
325bp
 PREDICTED:_protein_held_out_wings_isoform_X4_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6139 O_BomoSK15526_complete:A_BomoSK_comp13710_c1_seq8
155bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X3_[Condylura_cristata]
6140 O_BomoSK15527_complete:A_BomoSK_comp13710_c1_seq8
140bp
 AAEL007338-PA_[Aedes_aegypti]
6141 O_BomoSK15528_complete:A_BomoSK_comp13710_c1_seq8
101bp
6142 O_BomoSK15529_complete:A_BomoSK_comp13710_c1_seq9
330bp
 PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6143 O_BomoSK1552_internal:A_BomoSK_comp4359_c0_seq1
139bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
6144 O_BomoSK15530_complete:A_BomoSK_comp13710_c1_seq9
140bp
 AAEL007338-PA_[Aedes_aegypti]
6145 O_BomoSK15531_complete:A_BomoSK_comp13710_c1_seq9
108bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X2_[Condylura_cristata]
6146 O_BomoSK15532_complete:A_BomoSK_comp13710_c1_seq9
101bp
6147 O_BomoSK15533_complete:A_BomoSK_comp13710_c1_seq10
223bp
 PREDICTED:_protein_held_out_wings_isoform_X3_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6148 O_BomoSK15534_complete:A_BomoSK_comp13710_c1_seq10
140bp
 AAEL007338-PA_[Aedes_aegypti]
6149 O_BomoSK15535_complete:A_BomoSK_comp13710_c1_seq12
340bp
 PREDICTED:_protein_held_out_wings_isoform_X4_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
6150 O_BomoSK15536_complete:A_BomoSK_comp13710_c1_seq12
155bp
 PREDICTED:_mesoderm_induction_early_response_protein_1_isoform_X3_[Condylura_cristata]
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