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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5851 O_BomoSK15267_5prime_partial:A_BomoSK_comp13676_c0_seq5
412bp
 PREDICTED:_intraflagellar_transport_protein_52_homolog_[Bombyx_mori]
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0007368 P determination of left/right symmetry
GO:0008022 F protein C-terminus binding
GO:0009953 P dorsal/ventral pattern formation
GO:0030992 C intraciliary transport particle B
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0044292 C dendrite terminus
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060271 P cilium assembly
GO:0070613 P regulation of protein processing
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:0097546 C ciliary base
5852 O_BomoSK15268_5prime_partial:A_BomoSK_comp13677_c0_seq1
208bp
 PREDICTED:_uncharacterized_protein_LOC101737333_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
5853 O_BomoSK15269_complete:A_BomoSK_comp13677_c0_seq1
115bp
 PREDICTED:_uncharacterized_protein_LOC103704097_[Phoenix_dactylifera]
5854 O_BomoSK1526_complete:A_BomoSK_comp4337_c0_seq1
123bp
 esterase_[Massilia_sp._NR_4-1]
5855 O_BomoSK15270_5prime_partial:A_BomoSK_comp13677_c0_seq2
218bp
 PREDICTED:_uncharacterized_protein_LOC101737333_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
5856 O_BomoSK15271_5prime_partial:A_BomoSK_comp13677_c0_seq3
208bp
 PREDICTED:_uncharacterized_protein_LOC101737333_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
5857 O_BomoSK15272_complete:A_BomoSK_comp13677_c0_seq3
139bp
 PREDICTED:_eyes_absent_homolog_3,_partial_[Galeopterus_variegatus]
5858 O_BomoSK15273_complete:A_BomoSK_comp13677_c0_seq3
115bp
 PREDICTED:_uncharacterized_protein_LOC103704097_[Phoenix_dactylifera]
5859 O_BomoSK15274_5prime_partial:A_BomoSK_comp13677_c0_seq4
262bp
 PREDICTED:_uncharacterized_protein_LOC101737333_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
5860 O_BomoSK15275_complete:A_BomoSK_comp13677_c0_seq4
212bp
 Eyes_absent_3,_partial_[Chlamydotis_macqueenii]
5861 O_BomoSK15276_3prime_partial:A_BomoSK_comp13678_c0_seq1
754bp
 PREDICTED:_spermatogenesis-associated_protein_20-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0030154 P cell differentiation
5862 O_BomoSK15277_internal:A_BomoSK_comp13678_c0_seq2
729bp
 PREDICTED:_spermatogenesis-associated_protein_20-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0030154 P cell differentiation
5863 O_BomoSK15278_complete:A_BomoSK_comp13679_c0_seq1
433bp
 PREDICTED:_endonuclease_III-like_protein_1_isoform_X3_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
5864 O_BomoSK15279_complete:A_BomoSK_comp13679_c0_seq2
475bp
 PREDICTED:_endonuclease_III-like_protein_1_isoform_X3_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
5865 O_BomoSK1527_3prime_partial:A_BomoSK_comp4338_c0_seq1
308bp
 putative_DNA_replication_licensing_factor_MCM4_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007052 P mitotic spindle organization
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
5866 O_BomoSK15280_complete:A_BomoSK_comp13680_c0_seq1
1137bp
 PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
5867 O_BomoSK15281_complete:A_BomoSK_comp13680_c0_seq1
406bp
 PREDICTED:_protoheme_IX_farnesyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000266 P mitochondrial fission
GO:0004129 F cytochrome-c oxidase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0006783 P heme biosynthetic process
GO:0006784 P heme A biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008495 F protoheme IX farnesyltransferase activity
GO:0008535 P respiratory chain complex IV assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0017004 P cytochrome complex assembly
GO:0018343 P protein farnesylation
GO:0031966 C mitochondrial membrane
GO:0045333 P cellular respiration
GO:0048034 P heme O biosynthetic process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
5868 O_BomoSK15282_complete:A_BomoSK_comp13680_c0_seq1
164bp
 peptide_ABC_transporter_substrate-binding_protein_[Lactobacillus_nagelii]
5869 O_BomoSK15283_complete:A_BomoSK_comp13680_c0_seq2
1137bp
 PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
5870 O_BomoSK15284_complete:A_BomoSK_comp13680_c0_seq2
178bp
 PREDICTED:_protoheme_IX_farnesyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000266 P mitochondrial fission
GO:0004129 F cytochrome-c oxidase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0006783 P heme biosynthetic process
GO:0006784 P heme A biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008495 F protoheme IX farnesyltransferase activity
GO:0008535 P respiratory chain complex IV assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0017004 P cytochrome complex assembly
GO:0018343 P protein farnesylation
GO:0031966 C mitochondrial membrane
GO:0045333 P cellular respiration
GO:0048034 P heme O biosynthetic process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
5871 O_BomoSK15285_complete:A_BomoSK_comp13680_c0_seq2
164bp
 peptide_ABC_transporter_substrate-binding_protein_[Lactobacillus_nagelii]
5872 O_BomoSK15286_complete:A_BomoSK_comp13680_c0_seq3
1137bp
 PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
5873 O_BomoSK15287_complete:A_BomoSK_comp13680_c0_seq3
172bp
 PREDICTED:_protoheme_IX_farnesyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000266 P mitochondrial fission
GO:0004129 F cytochrome-c oxidase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0006783 P heme biosynthetic process
GO:0006784 P heme A biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008495 F protoheme IX farnesyltransferase activity
GO:0008535 P respiratory chain complex IV assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0017004 P cytochrome complex assembly
GO:0018343 P protein farnesylation
GO:0031966 C mitochondrial membrane
GO:0045333 P cellular respiration
GO:0048034 P heme O biosynthetic process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
5874 O_BomoSK15288_complete:A_BomoSK_comp13680_c0_seq3
164bp
 peptide_ABC_transporter_substrate-binding_protein_[Lactobacillus_nagelii]
5875 O_BomoSK15289_complete:A_BomoSK_comp13680_c0_seq4
1137bp
 PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
5876 O_BomoSK1528_3prime_partial:A_BomoSK_comp4338_c0_seq2
223bp
 PREDICTED:_DNA_replication_licensing_factor_MCM4_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007052 P mitotic spindle organization
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042023 P DNA endoreduplication
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
5877 O_BomoSK15290_complete:A_BomoSK_comp13680_c0_seq4
164bp
 peptide_ABC_transporter_substrate-binding_protein_[Lactobacillus_nagelii]
5878 O_BomoSK15291_complete:A_BomoSK_comp13680_c0_seq5
1137bp
 PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
5879 O_BomoSK15292_complete:A_BomoSK_comp13680_c0_seq5
400bp
 PREDICTED:_protoheme_IX_farnesyltransferase,_mitochondrial_[Bombyx_mori]
GO:0000266 P mitochondrial fission
GO:0004129 F cytochrome-c oxidase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0006783 P heme biosynthetic process
GO:0006784 P heme A biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008495 F protoheme IX farnesyltransferase activity
GO:0008535 P respiratory chain complex IV assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0017004 P cytochrome complex assembly
GO:0018343 P protein farnesylation
GO:0031966 C mitochondrial membrane
GO:0045333 P cellular respiration
GO:0048034 P heme O biosynthetic process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
5880 O_BomoSK15293_complete:A_BomoSK_comp13680_c0_seq5
164bp
 peptide_ABC_transporter_substrate-binding_protein_[Lactobacillus_nagelii]
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