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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5671 O_BomoSK15104_complete:A_BomoSK_comp13639_c0_seq1
484bp
 PREDICTED:_histone_deacetylase_Rpd3_[Papilio_polytes]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005705 C polytene chromosome interband
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0008340 P determination of adult lifespan
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016580 C Sin3 complex
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0022904 P respiratory electron transport chain
GO:0031523 C Myb complex
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0035065 P regulation of histone acetylation
GO:0035098 C ESC/E(Z) complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050771 P negative regulation of axonogenesis
GO:0070822 C Sin3-type complex
GO:0070932 P histone H3 deacetylation
GO:0070983 P dendrite guidance
GO:2001229 P negative regulation of response to gamma radiation
5672 O_BomoSK15105_complete:A_BomoSK_comp13640_c0_seq1
1067bp
 PREDICTED:_sterol_regulatory_element-binding_protein_2_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003062 P regulation of heart rate by chemical signal
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0008610 P lipid biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009749 P response to glucose
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030324 P lung development
GO:0031065 P positive regulation of histone deacetylation
GO:0031410 C cytoplasmic vesicle
GO:0031647 P regulation of protein stability
GO:0032094 P response to food
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0032570 P response to progesterone
GO:0032810 F sterol response element binding
GO:0032869 P cellular response to insulin stimulus
GO:0033762 P response to glucagon
GO:0033993 P response to lipid
GO:0042493 P response to xenobiotic stimulus
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045444 P fat cell differentiation
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046676 P negative regulation of insulin secretion
GO:0046983 F protein dimerization activity
GO:0050796 P regulation of insulin secretion
GO:0051591 P response to cAMP
GO:0070542 P response to fatty acid
GO:0071398 P cellular response to fatty acid
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
5673 O_BomoSK15106_complete:A_BomoSK_comp13640_c0_seq1
103bp
5674 O_BomoSK15107_complete:A_BomoSK_comp13640_c0_seq2
1067bp
 PREDICTED:_sterol_regulatory_element-binding_protein_2_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003062 P regulation of heart rate by chemical signal
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0008610 P lipid biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009749 P response to glucose
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030324 P lung development
GO:0031065 P positive regulation of histone deacetylation
GO:0031410 C cytoplasmic vesicle
GO:0031647 P regulation of protein stability
GO:0032094 P response to food
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0032570 P response to progesterone
GO:0032810 F sterol response element binding
GO:0032869 P cellular response to insulin stimulus
GO:0033762 P response to glucagon
GO:0033993 P response to lipid
GO:0042493 P response to xenobiotic stimulus
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045444 P fat cell differentiation
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046676 P negative regulation of insulin secretion
GO:0046983 F protein dimerization activity
GO:0050796 P regulation of insulin secretion
GO:0051591 P response to cAMP
GO:0070542 P response to fatty acid
GO:0071398 P cellular response to fatty acid
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
5675 O_BomoSK15108_complete:A_BomoSK_comp13640_c0_seq2
103bp
5676 O_BomoSK15109_complete:A_BomoSK_comp13641_c0_seq1
223bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
5677 O_BomoSK1510_internal:A_BomoSK_comp4323_c0_seq1
185bp
5678 O_BomoSK15110_complete:A_BomoSK_comp13641_c0_seq1
130bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
5679 O_BomoSK15111_complete:A_BomoSK_comp13641_c0_seq2
223bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
5680 O_BomoSK15112_complete:A_BomoSK_comp13641_c0_seq4
223bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
5681 O_BomoSK15113_complete:A_BomoSK_comp13641_c0_seq5
353bp
 methylthioribose-1-phosphate_isomerase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016853 F isomerase activity
GO:0019284 P L-methionine salvage from S-adenosylmethionine
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0044237 P cellular metabolic process
GO:0044249 P cellular biosynthetic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
5682 O_BomoSK15114_complete:A_BomoSK_comp13642_c0_seq2
770bp
 PREDICTED:_dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_STT3B_isoform_X1_[Bombyx_mori]
GO:0004576 F oligosaccharyl transferase activity
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006516 P glycoprotein catabolic process
GO:0006986 P response to unfolded protein
GO:0008250 C oligosaccharyltransferase complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0043686 P co-translational protein modification
GO:0043687 P post-translational protein modification
5683 O_BomoSK15115_complete:A_BomoSK_comp13643_c1_seq2
319bp
 PREDICTED:_uncharacterized_protein_LOC101738833_[Bombyx_mori]
5684 O_BomoSK15116_complete:A_BomoSK_comp13643_c1_seq4
319bp
 PREDICTED:_uncharacterized_protein_LOC101738833_[Bombyx_mori]
5685 O_BomoSK15117_complete:A_BomoSK_comp13643_c1_seq5
319bp
 PREDICTED:_uncharacterized_protein_LOC101738833_[Bombyx_mori]
5686 O_BomoSK15118_5prime_partial:A_BomoSK_comp13644_c0_seq1
853bp
 PREDICTED:_adenomatous_polyposis_coli_protein-like_isoform_X1_[Bombyx_mori]
5687 O_BomoSK15119_3prime_partial:A_BomoSK_comp13644_c0_seq1
144bp
5688 O_BomoSK1511_internal:A_BomoSK_comp4323_c0_seq1
185bp
 PREDICTED:_helicase_domino-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000812 C Swr1 complex
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:1990405 F protein antigen binding
5689 O_BomoSK15120_complete:A_BomoSK_comp13644_c0_seq1
123bp
 PREDICTED:_carcinoembryonic_antigen-related_cell_adhesion_molecule_1-like,_partial_[Alligator_sinensis]
5690 O_BomoSK15121_complete:A_BomoSK_comp13645_c1_seq1
1443bp
 PREDICTED:_uncharacterized_protein_LOC101738134_isoform_X2_[Bombyx_mori]
GO:0001822 P kidney development
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0007130 P synaptonemal complex assembly
GO:0007283 P spermatogenesis
GO:0007420 P brain development
GO:0009790 P embryo development
GO:0016568 P chromatin organization
GO:0018393 P internal peptidyl-lysine acetylation
GO:0030324 P lung development
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043022 F ribosome binding
GO:0045861 P negative regulation of proteolysis
GO:0050821 P protein stabilization
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070628 F proteasome binding
GO:0071816 P tail-anchored membrane protein insertion into ER membrane
GO:0071818 C BAT3 complex
5691 O_BomoSK15122_complete:A_BomoSK_comp13645_c1_seq1
145bp
 UDP-hexose_transferase_[Methylobacterium_oryzae_CBMB20]
5692 O_BomoSK15123_complete:A_BomoSK_comp13645_c1_seq1
111bp
 phosphohydrolase_[Eubacterium_ramulus]
5693 O_BomoSK15124_complete:A_BomoSK_comp13645_c1_seq1
103bp
 1,4-beta-xylanase_[Legionella_pneumophila]
5694 O_BomoSK15125_complete:A_BomoSK_comp13645_c1_seq2
162bp
 PREDICTED:_uncharacterized_protein_LOC101738134_isoform_X3_[Bombyx_mori]
GO:0001822 P kidney development
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0007130 P synaptonemal complex assembly
GO:0007283 P spermatogenesis
GO:0007420 P brain development
GO:0009790 P embryo development
GO:0016568 P chromatin organization
GO:0018393 P internal peptidyl-lysine acetylation
GO:0030324 P lung development
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0042981 P regulation of apoptotic process
GO:0043022 F ribosome binding
GO:0045861 P negative regulation of proteolysis
GO:0050821 P protein stabilization
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070628 F proteasome binding
GO:0071816 P tail-anchored membrane protein insertion into ER membrane
GO:0071818 C BAT3 complex
5695 O_BomoSK15126_complete:A_BomoSK_comp13646_c0_seq2
516bp
 PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5696 O_BomoSK15127_complete:A_BomoSK_comp13646_c0_seq2
101bp
 Putative_Pol_polyprotein,_partial_[Corvus_brachyrhynchos]
5697 O_BomoSK15128_complete:A_BomoSK_comp13646_c0_seq4
539bp
 PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5698 O_BomoSK15129_complete:A_BomoSK_comp13646_c0_seq4
103bp
 hypothetical_protein_[Thermanaerothrix_daxensis]
5699 O_BomoSK1512_3prime_partial:A_BomoSK_comp4325_c0_seq1
311bp
 PREDICTED:_uncharacterized_protein_LOC101742101_[Bombyx_mori]
5700 O_BomoSK15130_complete:A_BomoSK_comp13646_c0_seq4
101bp
 Putative_Pol_polyprotein,_partial_[Corvus_brachyrhynchos]
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