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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5491 O_BomoSK14943_complete:A_BomoSK_comp13623_c0_seq2
102bp
 PREDICTED:_uncharacterized_protein_LOC105841352_[Bombyx_mori]
5492 O_BomoSK14944_5prime_partial:A_BomoSK_comp13623_c0_seq3
156bp
 Fibroblast_growth_factor_receptor_4_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0045792 P negative regulation of cell size
GO:0090303 P positive regulation of wound healing
5493 O_BomoSK14945_5prime_partial:A_BomoSK_comp13623_c0_seq3
144bp
 PREDICTED:_tyrosine-protein_kinase_Srms_isoform_X1_[Saimiri_boliviensis_boliviensis]
5494 O_BomoSK14946_5prime_partial:A_BomoSK_comp13623_c0_seq4
277bp
 PREDICTED:_dual_specificity_protein_kinase_splB_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0045792 P negative regulation of cell size
GO:0090303 P positive regulation of wound healing
5495 O_BomoSK14947_5prime_partial:A_BomoSK_comp13623_c0_seq4
144bp
 PREDICTED:_tyrosine-protein_kinase_Srms_isoform_X1_[Saimiri_boliviensis_boliviensis]
5496 O_BomoSK14948_complete:A_BomoSK_comp13624_c1_seq1
757bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Bombyx_mori]
5497 O_BomoSK14949_complete:A_BomoSK_comp13624_c1_seq1
242bp
 hypothetical_protein_PMG11_03290_[Penicillium_brasilianum]
5498 O_BomoSK1494_internal:A_BomoSK_comp4299_c0_seq1
666bp
 PREDICTED:_DNA_mismatch_repair_protein_Msh2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0030983 F mismatched DNA binding
GO:0032300 C mismatch repair complex
GO:0032301 C MutSalpha complex
5499 O_BomoSK14950_complete:A_BomoSK_comp13624_c1_seq1
141bp
 hypothetical_protein_PSTG_05685_[Puccinia_striiformis_f._sp._tritici_PST-78]
5500 O_BomoSK14951_complete:A_BomoSK_comp13625_c0_seq1
381bp
 PREDICTED:_early_growth_response_protein_3_isoform_X2_[Bombyx_mori]
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0002042 P cell migration involved in sprouting angiogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007274 P neuromuscular synaptic transmission
GO:0007422 P peripheral nervous system development
GO:0033089 P positive regulation of T cell differentiation in thymus
GO:0035767 P endothelial cell chemotaxis
GO:0035924 P cellular response to vascular endothelial growth factor stimulus
GO:0043066 P negative regulation of apoptotic process
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0045586 P regulation of gamma-delta T cell differentiation
GO:0046872 F metal ion binding
5501 O_BomoSK14952_complete:A_BomoSK_comp13625_c0_seq1
207bp
5502 O_BomoSK14953_complete:A_BomoSK_comp13625_c0_seq1
188bp
5503 O_BomoSK14954_complete:A_BomoSK_comp13625_c0_seq1
105bp
 hypothetical_protein_[Solimonas_variicoloris]
5504 O_BomoSK14955_complete:A_BomoSK_comp13626_c1_seq1
1623bp
 PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
5505 O_BomoSK14956_complete:A_BomoSK_comp13626_c1_seq1
121bp
 GMP_synthase_[Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._0006]
5506 O_BomoSK14957_complete:A_BomoSK_comp13626_c1_seq1
117bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_pericentrin-like,_partial_[Pongo_abelii]
5507 O_BomoSK14958_complete:A_BomoSK_comp13626_c1_seq1
107bp
 hypothetical_protein_[Clostridium_acetobutylicum]
5508 O_BomoSK14959_complete:A_BomoSK_comp13626_c1_seq1
104bp
 DNA-binding_response_regulator_[Cupriavidus_taiwanensis]
5509 O_BomoSK1495_5prime_partial:A_BomoSK_comp4305_c1_seq1
113bp
 dicer-1_[Anopheles_darlingi]
5510 O_BomoSK14960_complete:A_BomoSK_comp13626_c1_seq1
101bp
 hypothetical_protein_[Hafnia_alvei]
5511 O_BomoSK14961_complete:A_BomoSK_comp13626_c1_seq2
1544bp
 PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X3_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
5512 O_BomoSK14962_complete:A_BomoSK_comp13626_c1_seq2
121bp
 GMP_synthase_[Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._0006]
5513 O_BomoSK14963_complete:A_BomoSK_comp13626_c1_seq2
117bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_pericentrin-like,_partial_[Pongo_abelii]
5514 O_BomoSK14964_complete:A_BomoSK_comp13626_c1_seq2
107bp
 hypothetical_protein_[Clostridium_acetobutylicum]
5515 O_BomoSK14965_complete:A_BomoSK_comp13626_c1_seq2
104bp
 DNA-binding_response_regulator_[Cupriavidus_taiwanensis]
5516 O_BomoSK14966_complete:A_BomoSK_comp13626_c1_seq2
101bp
 hypothetical_protein_[Hafnia_alvei]
5517 O_BomoSK14967_complete:A_BomoSK_comp13626_c1_seq3
1544bp
 PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X3_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
5518 O_BomoSK14968_complete:A_BomoSK_comp13626_c1_seq3
121bp
 GMP_synthase_[Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._0006]
5519 O_BomoSK14969_complete:A_BomoSK_comp13626_c1_seq3
117bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_pericentrin-like,_partial_[Pongo_abelii]
5520 O_BomoSK1496_3prime_partial:A_BomoSK_comp4308_c0_seq1
390bp
 PREDICTED:_nuclear_factor_1_B-type_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
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