Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
5101	O_BomoSK14592_complete:A_BomoSK_comp13571_c0_seq7 182bp	Bomo_Chr15	PREDICTED:_uncharacterized_protein_LOC106114748_[Papilio_xuthus]	GO:0000724 P double-strand break repair via homologous recombination GO:0000729 P DNA double-strand break processing GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006139 P nucleobase-containing compound metabolic process GO:0006302 P double-strand break repair GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity GO:0008408 F 3'-5' exonuclease activity GO:0008852 F exodeoxyribonuclease I activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5102	O_BomoSK14593_3prime_partial:A_BomoSK_comp13571_c0_seq7 181bp	Bomo_Chr15	PREDICTED:_exonuclease_3'-5'_domain-containing_protein_2_[Papilio_machaon]	GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006139 P nucleobase-containing compound metabolic process GO:0006259 P DNA metabolic process GO:0008408 F 3'-5' exonuclease activity GO:0008852 F exodeoxyribonuclease I activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5103	O_BomoSK14594_5prime_partial:A_BomoSK_comp13571_c0_seq7 126bp	Bomo_Chr15
5104	O_BomoSK14595_5prime_partial:A_BomoSK_comp13571_c0_seq7 110bp	Bomo_Chr15	hypothetical_protein_IscW_ISCW011510_[Ixodes_scapularis]
5105	O_BomoSK14596_5prime_partial:A_BomoSK_comp13572_c0_seq2 2697bp	Bomo_Chr5	PREDICTED:_LOW_QUALITY_PROTEIN:_muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]	GO:0004672 F protein kinase activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0017048 F small GTPase binding GO:0019902 F phosphatase binding GO:0030241 P skeletal muscle myosin thick filament assembly GO:0031034 P myosin filament assembly GO:0031430 C M band GO:0031672 C A band GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
5106	O_BomoSK14597_complete:A_BomoSK_comp13572_c0_seq2 236bp	Bomo_Chr5	SsrA-binding_protein_[Desulfonatronum_thioautotrophicum]
5107	O_BomoSK14598_complete:A_BomoSK_comp13572_c0_seq2 208bp	Bomo_Chr5
5108	O_BomoSK14599_complete:A_BomoSK_comp13572_c0_seq2 189bp	Bomo_Chr5	putative_DNA_binding_protein_[uncultured_marine_group_II/III_euryarchaeote_KM3_62_D04]
5109	O_BomoSK1459_internal:A_BomoSK_comp4244_c0_seq2 248bp	Bomo_Chr7	PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
5110	O_BomoSK145_internal:A_BomoSK_comp455_c1_seq1 114bp	Bomo_Chr15	hypothetical_protein_KGM_11261_[Danaus_plexippus]	GO:0004842 F ubiquitin-protein transferase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005575 C cellular_component GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005814 C centriole GO:0005856 C cytoskeleton GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0042787 P ubiquitin-dependent protein catabolic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding
5111	O_BomoSK14600_complete:A_BomoSK_comp13572_c0_seq2 154bp	Bomo_Chr5	hypothetical_protein_ALC53_08737,_partial_[Atta_colombica]
5112	O_BomoSK14601_complete:A_BomoSK_comp13572_c0_seq2 113bp	Bomo_Chr5	hypothetical_protein_[Methylobacterium_tarhaniae]
5113	O_BomoSK14602_complete:A_BomoSK_comp13572_c0_seq2 109bp	Bomo_Chr5	hypothetical_protein_GLYMA_01G205100_[Glycine_max]
5114	O_BomoSK14603_complete:A_BomoSK_comp13572_c0_seq2 101bp	Bomo_Chr5	acyltransferase_[Azovibrio_restrictus]
5115	O_BomoSK14604_5prime_partial:A_BomoSK_comp13572_c0_seq3 3005bp	Bomo_Chr5	PREDICTED:_LOW_QUALITY_PROTEIN:_muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]	GO:0004672 F protein kinase activity GO:0005089 F guanyl-nucleotide exchange factor activity GO:0005524 F ATP binding GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0017048 F small GTPase binding GO:0019902 F phosphatase binding GO:0030241 P skeletal muscle myosin thick filament assembly GO:0031034 P myosin filament assembly GO:0031430 C M band GO:0031672 C A band GO:0035023 P regulation of Rho protein signal transduction GO:0043547 P positive regulation of GTPase activity
5116	O_BomoSK14605_complete:A_BomoSK_comp13572_c0_seq3 293bp	Bomo_Chr5
5117	O_BomoSK14606_complete:A_BomoSK_comp13572_c0_seq3 236bp	Bomo_Chr5	SsrA-binding_protein_[Desulfonatronum_thioautotrophicum]
5118	O_BomoSK14607_complete:A_BomoSK_comp13572_c0_seq3 189bp	Bomo_Chr5	putative_DNA_binding_protein_[uncultured_marine_group_II/III_euryarchaeote_KM3_62_D04]
5119	O_BomoSK14608_complete:A_BomoSK_comp13572_c0_seq3 154bp	Bomo_Chr5	hypothetical_protein_ALC53_08737,_partial_[Atta_colombica]
5120	O_BomoSK14609_complete:A_BomoSK_comp13572_c0_seq3 113bp	Bomo_Chr5	hypothetical_protein_[Methylobacterium_tarhaniae]
5121	O_BomoSK1460_5prime_partial:A_BomoSK_comp4244_c0_seq2 107bp	Bomo_Chr7
5122	O_BomoSK14610_complete:A_BomoSK_comp13572_c0_seq3 109bp	Bomo_Chr5	hypothetical_protein_GLYMA_01G205100_[Glycine_max]
5123	O_BomoSK14611_complete:A_BomoSK_comp13572_c0_seq3 101bp	Bomo_Chr5	acyltransferase_[Azovibrio_restrictus]
5124	O_BomoSK14612_complete:A_BomoSK_comp13573_c0_seq1 190bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC105389192_[Plutella_xylostella]
5125	O_BomoSK14613_complete:A_BomoSK_comp13574_c0_seq1 308bp	Bomo_Chr25	PREDICTED:_protein_farnesyltransferase_subunit_beta_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004311 F farnesyltranstransferase activity GO:0004659 F prenyltransferase activity GO:0004660 F protein farnesyltransferase activity GO:0005875 C microtubule associated complex GO:0005965 C protein farnesyltransferase complex GO:0008144 F obsolete drug binding GO:0008270 F zinc ion binding GO:0008284 P positive regulation of cell population proliferation GO:0008285 P negative regulation of cell population proliferation GO:0010035 P response to inorganic substance GO:0014070 P response to organic cyclic compound GO:0016740 F transferase activity GO:0018343 P protein farnesylation GO:0019840 F isoprenoid binding GO:0034097 P response to cytokine GO:0042060 P wound healing GO:0042127 P regulation of cell population proliferation GO:0042277 F peptide binding GO:0043234 C protein-containing complex GO:0045787 P positive regulation of cell cycle GO:0046872 F metal ion binding GO:0048146 P positive regulation of fibroblast proliferation GO:0051770 P positive regulation of nitric-oxide synthase biosynthetic process
5126	O_BomoSK14614_complete:A_BomoSK_comp13574_c0_seq2 406bp	Bomo_Chr25	PREDICTED:_protein_farnesyltransferase_subunit_beta_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004311 F farnesyltranstransferase activity GO:0004659 F prenyltransferase activity GO:0004660 F protein farnesyltransferase activity GO:0005515 F protein binding GO:0005829 C cytosol GO:0005875 C microtubule associated complex GO:0005965 C protein farnesyltransferase complex GO:0008144 F obsolete drug binding GO:0008270 F zinc ion binding GO:0008284 P positive regulation of cell population proliferation GO:0008285 P negative regulation of cell population proliferation GO:0010035 P response to inorganic substance GO:0014070 P response to organic cyclic compound GO:0016740 F transferase activity GO:0018343 P protein farnesylation GO:0019840 F isoprenoid binding GO:0022400 P regulation of rhodopsin mediated signaling pathway GO:0034097 P response to cytokine GO:0042060 P wound healing GO:0042127 P regulation of cell population proliferation GO:0042277 F peptide binding GO:0043234 C protein-containing complex GO:0045787 P positive regulation of cell cycle GO:0046872 F metal ion binding GO:0048146 P positive regulation of fibroblast proliferation GO:0051770 P positive regulation of nitric-oxide synthase biosynthetic process
5127	O_BomoSK14615_5prime_partial:A_BomoSK_comp13576_c0_seq1 1720bp	Bomo_Scaf278	PREDICTED:_restin_homolog_isoform_X9_[Bombyx_mori]	GO:0000776 C kinetochore GO:0003779 F actin binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0005875 C microtubule associated complex GO:0005876 C spindle microtubule GO:0007017 P microtubule-based process GO:0007349 P cellularization GO:0008017 F microtubule binding GO:0030424 C axon GO:0035371 C microtubule plus-end GO:0044295 C axonal growth cone GO:0045169 C fusome GO:0051010 F microtubule plus-end binding GO:0070854 F myosin VI heavy chain binding
5128	O_BomoSK14616_complete:A_BomoSK_comp13576_c0_seq1 109bp	Bomo_Scaf278	helix-turn-helix_transcriptional_regulator_[Adlercreutzia_equolifaciens]
5129	O_BomoSK14617_complete:A_BomoSK_comp13576_c0_seq2 446bp	Bomo_Chr10	PREDICTED:_restin_homolog_isoform_X1_[Bombyx_mori]	GO:0000776 C kinetochore GO:0003779 F actin binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0005875 C microtubule associated complex GO:0005876 C spindle microtubule GO:0007017 P microtubule-based process GO:0007349 P cellularization GO:0008017 F microtubule binding GO:0030424 C axon GO:0035371 C microtubule plus-end GO:0044295 C axonal growth cone GO:0045169 C fusome GO:0051010 F microtubule plus-end binding GO:0070854 F myosin VI heavy chain binding
5130	O_BomoSK14618_complete:A_BomoSK_comp13576_c0_seq2 168bp	Bomo_Chr10	sigma-54-dependent_Fis_family_transcriptional_regulator_[Chitinophagaceae_bacterium_PMP191F]