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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4891 O_BomoSK14402_complete:A_BomoSK_comp13515_c0_seq1
233bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4892 O_BomoSK14403_complete:A_BomoSK_comp13515_c0_seq3
119bp
4893 O_BomoSK14404_complete:A_BomoSK_comp13515_c0_seq3
106bp
 PREDICTED:_uncharacterized_protein_LOC106129727_[Amyelois_transitella]
4894 O_BomoSK14405_complete:A_BomoSK_comp13515_c0_seq4
233bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4895 O_BomoSK14406_complete:A_BomoSK_comp13515_c0_seq5
229bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4896 O_BomoSK14407_complete:A_BomoSK_comp13515_c0_seq6
257bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4897 O_BomoSK14408_complete:A_BomoSK_comp13515_c0_seq6
108bp
 hypothetical_protein_[Streptomyces_acidiscabies]
4898 O_BomoSK14409_complete:A_BomoSK_comp13515_c0_seq7
229bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4899 O_BomoSK1440_5prime_partial:A_BomoSK_comp4228_c0_seq2
254bp
4900 O_BomoSK14410_complete:A_BomoSK_comp13515_c0_seq8
233bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4901 O_BomoSK14411_complete:A_BomoSK_comp13515_c0_seq9
261bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4902 O_BomoSK14412_complete:A_BomoSK_comp13515_c0_seq9
112bp
 SAM-dependent_methyltransferase_[Streptomyces_prunicolor]
4903 O_BomoSK14413_complete:A_BomoSK_comp13515_c0_seq10
257bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4904 O_BomoSK14414_complete:A_BomoSK_comp13515_c0_seq10
108bp
 hypothetical_protein_[Streptomyces_acidiscabies]
4905 O_BomoSK14415_complete:A_BomoSK_comp13515_c0_seq11
257bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4906 O_BomoSK14416_complete:A_BomoSK_comp13515_c0_seq11
108bp
 hypothetical_protein_[Streptomyces_acidiscabies]
4907 O_BomoSK14417_complete:A_BomoSK_comp13515_c0_seq12
261bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4908 O_BomoSK14418_complete:A_BomoSK_comp13515_c0_seq12
112bp
 SAM-dependent_methyltransferase_[Streptomyces_prunicolor]
4909 O_BomoSK14419_complete:A_BomoSK_comp13515_c0_seq13
119bp
4910 O_BomoSK1441_3prime_partial:A_BomoSK_comp4228_c0_seq2
217bp
 PREDICTED:_lysine-specific_demethylase_6A_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0010468 P regulation of gene expression
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032452 F histone demethylase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0071557 P histone H3-K27 demethylation
GO:0071558 F histone H3-tri/di-methyl-lysine-27 demethylase activity
4911 O_BomoSK14420_complete:A_BomoSK_comp13515_c0_seq13
106bp
 PREDICTED:_uncharacterized_protein_LOC106129727_[Amyelois_transitella]
4912 O_BomoSK14421_complete:A_BomoSK_comp13515_c0_seq14
229bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4913 O_BomoSK14422_complete:A_BomoSK_comp13515_c0_seq15
261bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
4914 O_BomoSK14423_complete:A_BomoSK_comp13515_c0_seq15
112bp
 SAM-dependent_methyltransferase_[Streptomyces_prunicolor]
4915 O_BomoSK14424_5prime_partial:A_BomoSK_comp13517_c0_seq1
160bp
 Progressive_ankylosis_protein-like_protein_[Macaca_mulatta]
4916 O_BomoSK14425_5prime_partial:A_BomoSK_comp13517_c0_seq2
160bp
 Progressive_ankylosis_protein-like_protein_[Macaca_mulatta]
4917 O_BomoSK14426_internal:A_BomoSK_comp13517_c0_seq3
819bp
 PREDICTED:_protein_toll-like_[Amyelois_transitella]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
4918 O_BomoSK14427_5prime_partial:A_BomoSK_comp13517_c0_seq3
440bp
4919 O_BomoSK14428_complete:A_BomoSK_comp13517_c0_seq3
116bp
4920 O_BomoSK14429_complete:A_BomoSK_comp13517_c0_seq3
113bp
 Acyl-CoA_dehydrogenase_[Pseudomonas_syringae_pv._papulans]
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