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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4681 O_BomoSK14213_complete:A_BomoSK_comp13480_c0_seq7
113bp
 predicted_protein_[Hordeum_vulgare_subsp._vulgare]
4682 O_BomoSK14214_complete:A_BomoSK_comp13480_c0_seq7
105bp
4683 O_BomoSK14215_complete:A_BomoSK_comp13480_c0_seq8
583bp
 PREDICTED:_uncharacterized_protein_LOC101745012_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0001540 F amyloid-beta binding
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005641 C nuclear envelope lumen
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005887 C integral component of plasma membrane
GO:0006605 P protein targeting
GO:0006622 P protein targeting to lysosome
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007165 P signal transduction
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0014910 P regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030169 F low-density lipoprotein particle binding
GO:0030306 F small GTPase binding
GO:0031985 C Golgi cisterna
GO:0032091 P negative regulation of protein binding
GO:0032460 P negative regulation of protein oligomerization
GO:0034362 C low-density lipoprotein particle
GO:0043407 P negative regulation of MAP kinase activity
GO:0045053 P protein retention in Golgi apparatus
GO:0045732 P positive regulation of protein catabolic process
GO:0050768 P negative regulation of neurogenesis
GO:0051604 P protein maturation
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:0070863 P positive regulation of protein exit from endoplasmic reticulum
GO:1901215 P negative regulation of neuron death
GO:1902430 P negative regulation of amyloid-beta formation
GO:1902771 P positive regulation of choline O-acetyltransferase activity
GO:1902948 P negative regulation of tau-protein kinase activity
GO:1902953 P positive regulation of ER to Golgi vesicle-mediated transport
GO:1902955 P positive regulation of early endosome to recycling endosome transport
GO:1902960 P negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process
GO:1902963 P negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process
GO:1902966 P positive regulation of protein localization to early endosome
GO:1902997 P negative regulation of neurofibrillary tangle assembly
GO:2001137 P positive regulation of endocytic recycling
4684 O_BomoSK14216_complete:A_BomoSK_comp13480_c0_seq8
107bp
4685 O_BomoSK14217_complete:A_BomoSK_comp13480_c0_seq8
105bp
4686 O_BomoSK14218_complete:A_BomoSK_comp13480_c0_seq9
3942bp
 PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X3_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
4687 O_BomoSK14219_complete:A_BomoSK_comp13480_c0_seq9
149bp
 methionine_ABC_transporter_substrate-binding_protein_[Jeotgalibacillus_soli_Cunha_et_al._2012]
4688 O_BomoSK1421_5prime_partial:A_BomoSK_comp4205_c0_seq1
227bp
 phosphoesterase_[Paenibacillus_vortex]
4689 O_BomoSK14220_complete:A_BomoSK_comp13480_c0_seq9
135bp
 RT09817p_[Drosophila_melanogaster]
4690 O_BomoSK14221_complete:A_BomoSK_comp13480_c0_seq9
130bp
 conserved_hypothetical_protein,_fragment,_partial_[Trypanosoma_vivax_Y486]
4691 O_BomoSK14222_complete:A_BomoSK_comp13480_c0_seq9
130bp
 iS4_family_transposase_ORF_2_[Acinetobacter_baumannii_1397084]
4692 O_BomoSK14223_complete:A_BomoSK_comp13480_c0_seq9
129bp
4693 O_BomoSK14224_complete:A_BomoSK_comp13480_c0_seq9
119bp
4694 O_BomoSK14225_complete:A_BomoSK_comp13480_c0_seq9
113bp
 predicted_protein_[Hordeum_vulgare_subsp._vulgare]
4695 O_BomoSK14226_complete:A_BomoSK_comp13480_c0_seq9
105bp
4696 O_BomoSK14227_complete:A_BomoSK_comp13481_c0_seq1
795bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4697 O_BomoSK14228_complete:A_BomoSK_comp13482_c0_seq1
121bp
 hypothetical_protein_M413DRAFT_236022_[Hebeloma_cylindrosporum_h7]
4698 O_BomoSK14229_complete:A_BomoSK_comp13483_c0_seq1
380bp
 UDP-glycosyltransferase_UGT40K1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
4699 O_BomoSK1422_complete:A_BomoSK_comp4205_c0_seq1
119bp
 PREDICTED:_uncharacterized_protein_LOC107005518_[Solanum_pennellii]
4700 O_BomoSK14230_complete:A_BomoSK_comp13483_c0_seq1
112bp
 UDP-glycosyltransferase_UGT40K1_[Bombyx_mori]
4701 O_BomoSK14231_complete:A_BomoSK_comp13483_c0_seq2
523bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
4702 O_BomoSK14232_complete:A_BomoSK_comp13483_c0_seq3
521bp
 UDP-glycosyltransferase_UGT40A1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
4703 O_BomoSK14233_complete:A_BomoSK_comp13483_c0_seq4
513bp
 UDP-glycosyltransferase_UGT40A1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
4704 O_BomoSK14234_complete:A_BomoSK_comp13483_c0_seq5
371bp
 UDP-glycosyltransferase_UGT40K1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
4705 O_BomoSK14235_complete:A_BomoSK_comp13483_c0_seq5
112bp
 UDP-glycosyltransferase_UGT40K1_[Bombyx_mori]
4706 O_BomoSK14236_complete:A_BomoSK_comp13483_c0_seq6
514bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
4707 O_BomoSK14237_complete:A_BomoSK_comp13484_c1_seq1
464bp
 PREDICTED:_differentially_expressed_in_FDCP_8_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0008150 P biological_process
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
4708 O_BomoSK14238_3prime_partial:A_BomoSK_comp13485_c0_seq1
855bp
 PREDICTED:_uncharacterized_protein_LOC101738225_isoform_X1_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051382 P kinetochore assembly
4709 O_BomoSK14239_5prime_partial:A_BomoSK_comp13485_c0_seq1
308bp
 virulence_factor_SrfB_[Franconibacter_pulveris]
4710 O_BomoSK1423_complete:A_BomoSK_comp4206_c0_seq1
910bp
 PREDICTED:_DNA_repair_protein_REV1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0017125 F deoxycytidyl transferase activity
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
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