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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3901 O_BomoSK13511_complete:A_BomoSK_comp13302_c0_seq3
152bp
3902 O_BomoSK13512_complete:A_BomoSK_comp13302_c0_seq3
125bp
3903 O_BomoSK13513_complete:A_BomoSK_comp13302_c0_seq4
408bp
 Arginine/serine-rich_protein_PNISR_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
3904 O_BomoSK13514_complete:A_BomoSK_comp13302_c0_seq4
318bp
 PREDICTED:_arginine/serine-rich_protein_PNISR_isoform_X2_[Papilio_machaon]
3905 O_BomoSK13515_complete:A_BomoSK_comp13302_c0_seq4
161bp
 Hypothetical_protein,_putative_[Bodo_saltans]
3906 O_BomoSK13516_complete:A_BomoSK_comp13302_c0_seq4
152bp
3907 O_BomoSK13517_complete:A_BomoSK_comp13302_c0_seq4
125bp
3908 O_BomoSK13518_complete:A_BomoSK_comp13302_c0_seq5
408bp
 Arginine/serine-rich_protein_PNISR_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
3909 O_BomoSK13519_complete:A_BomoSK_comp13302_c0_seq5
266bp
 40S_ribosomal_protein_S30_[Papilio_machaon]
3910 O_BomoSK1351_complete:A_BomoSK_comp4120_c0_seq1
108bp
 transmembrane_protein,_putative,_partial_[Bodo_saltans]
3911 O_BomoSK13520_complete:A_BomoSK_comp13302_c0_seq5
161bp
 Hypothetical_protein,_putative_[Bodo_saltans]
3912 O_BomoSK13521_complete:A_BomoSK_comp13302_c0_seq5
152bp
3913 O_BomoSK13522_complete:A_BomoSK_comp13302_c0_seq5
125bp
3914 O_BomoSK13523_complete:A_BomoSK_comp13302_c0_seq6
408bp
 Arginine/serine-rich_protein_PNISR_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
3915 O_BomoSK13524_complete:A_BomoSK_comp13302_c0_seq6
318bp
 PREDICTED:_arginine/serine-rich_protein_PNISR_isoform_X2_[Papilio_machaon]
3916 O_BomoSK13525_complete:A_BomoSK_comp13302_c0_seq6
172bp
3917 O_BomoSK13526_complete:A_BomoSK_comp13302_c0_seq6
161bp
 Hypothetical_protein,_putative_[Bodo_saltans]
3918 O_BomoSK13527_complete:A_BomoSK_comp13302_c0_seq6
125bp
3919 O_BomoSK13528_complete:A_BomoSK_comp13302_c0_seq7
408bp
 Arginine/serine-rich_protein_PNISR_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
3920 O_BomoSK13529_complete:A_BomoSK_comp13302_c0_seq7
266bp
 40S_ribosomal_protein_S30_[Papilio_machaon]
3921 O_BomoSK1352_complete:A_BomoSK_comp4120_c0_seq2
582bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_DDB1-_and_CUL4-associated_factor_10-like_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3922 O_BomoSK13530_complete:A_BomoSK_comp13302_c0_seq7
172bp
3923 O_BomoSK13531_complete:A_BomoSK_comp13302_c0_seq7
161bp
 Hypothetical_protein,_putative_[Bodo_saltans]
3924 O_BomoSK13532_complete:A_BomoSK_comp13302_c0_seq7
125bp
3925 O_BomoSK13533_complete:A_BomoSK_comp13304_c0_seq1
273bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
3926 O_BomoSK13534_5prime_partial:A_BomoSK_comp13304_c0_seq1
255bp
3927 O_BomoSK13535_3prime_partial:A_BomoSK_comp13304_c0_seq2
356bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
3928 O_BomoSK13536_complete:A_BomoSK_comp13304_c0_seq3
1300bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
3929 O_BomoSK13537_5prime_partial:A_BomoSK_comp13304_c0_seq3
255bp
3930 O_BomoSK13538_complete:A_BomoSK_comp13304_c0_seq3
164bp
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