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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3571 O_BomoSK13214_complete:A_BomoSK_comp13225_c0_seq8
152bp
3572 O_BomoSK13215_complete:A_BomoSK_comp13225_c0_seq8
142bp
 PREDICTED:_aspartyl/asparaginyl_beta-hydroxylase_isoform_X7_[Bombyx_mori]
3573 O_BomoSK13216_complete:A_BomoSK_comp13226_c0_seq1
378bp
 PREDICTED:_serine/arginine-rich_splicing_factor_4-like_[Amyelois_transitella]
3574 O_BomoSK13217_complete:A_BomoSK_comp13226_c0_seq2
378bp
 PREDICTED:_serine/arginine-rich_splicing_factor_4-like_[Amyelois_transitella]
3575 O_BomoSK13218_complete:A_BomoSK_comp13227_c0_seq1
472bp
 PREDICTED:_6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524 F ATP binding
GO:0006000 P fructose metabolic process
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0046835 P carbohydrate phosphorylation
3576 O_BomoSK13219_complete:A_BomoSK_comp13227_c0_seq1
292bp
 hypothetical_protein_[Geobacter_sp._M18]
3577 O_BomoSK1321_complete:A_BomoSK_comp4089_c0_seq1
101bp
 transglutaminase_[Micromonospora_sp._RV43]
3578 O_BomoSK13220_complete:A_BomoSK_comp13227_c0_seq1
108bp
 PREDICTED:_cyclin-dependent_kinase_G-2_isoform_X2_[Eucalyptus_grandis]
3579 O_BomoSK13221_5prime_partial:A_BomoSK_comp13227_c0_seq3
506bp
 PREDICTED:_6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524 F ATP binding
GO:0006000 P fructose metabolic process
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0046835 P carbohydrate phosphorylation
3580 O_BomoSK13222_complete:A_BomoSK_comp13227_c0_seq3
292bp
 hypothetical_protein_[Geobacter_sp._M18]
3581 O_BomoSK13223_complete:A_BomoSK_comp13227_c0_seq3
108bp
 PREDICTED:_cyclin-dependent_kinase_G-2_isoform_X2_[Eucalyptus_grandis]
3582 O_BomoSK13224_complete:A_BomoSK_comp13228_c0_seq1
559bp
 PREDICTED:_esterase_FE4-like_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
3583 O_BomoSK13225_complete:A_BomoSK_comp13228_c0_seq2
559bp
 PREDICTED:_esterase_FE4-like_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
3584 O_BomoSK13226_complete:A_BomoSK_comp13229_c0_seq1
710bp
 PREDICTED:_RING_finger_protein_10_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0010626 P negative regulation of Schwann cell proliferation
GO:0031643 P positive regulation of myelination
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
3585 O_BomoSK13227_complete:A_BomoSK_comp13229_c0_seq1
172bp
3586 O_BomoSK13228_internal:A_BomoSK_comp13230_c0_seq1
237bp
 PREDICTED:_uncharacterized_protein_LOC106709840_[Papilio_machaon]
3587 O_BomoSK13229_complete:A_BomoSK_comp13230_c0_seq1
111bp
 Alanyl-tRNA_synthetase_[Marinobacterium_sp._AK27]
3588 O_BomoSK1322_complete:A_BomoSK_comp4091_c0_seq1
314bp
 PREDICTED:_uncharacterized_protein_LOC105842376_[Bombyx_mori]
3589 O_BomoSK13230_internal:A_BomoSK_comp13230_c1_seq1
204bp
 PREDICTED:_uncharacterized_protein_LOC105841459_[Bombyx_mori]
3590 O_BomoSK13231_internal:A_BomoSK_comp13230_c1_seq2
422bp
 PREDICTED:_uncharacterized_protein_LOC101747137_[Bombyx_mori]
3591 O_BomoSK13232_complete:A_BomoSK_comp13233_c0_seq1
853bp
 PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3592 O_BomoSK13233_complete:A_BomoSK_comp13233_c0_seq1
103bp
 P-loop_containing_nucleoside_triphosphate_hydrolase_[Pseudocohnilembus_persalinus]
3593 O_BomoSK13234_complete:A_BomoSK_comp13233_c0_seq2
749bp
 PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3594 O_BomoSK13235_complete:A_BomoSK_comp13233_c0_seq2
103bp
 P-loop_containing_nucleoside_triphosphate_hydrolase_[Pseudocohnilembus_persalinus]
3595 O_BomoSK13236_complete:A_BomoSK_comp13233_c0_seq3
908bp
 PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3596 O_BomoSK13237_complete:A_BomoSK_comp13233_c0_seq3
103bp
 P-loop_containing_nucleoside_triphosphate_hydrolase_[Pseudocohnilembus_persalinus]
3597 O_BomoSK13238_complete:A_BomoSK_comp13233_c0_seq4
804bp
 PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3598 O_BomoSK13239_complete:A_BomoSK_comp13233_c0_seq4
103bp
 P-loop_containing_nucleoside_triphosphate_hydrolase_[Pseudocohnilembus_persalinus]
3599 O_BomoSK1323_5prime_partial:A_BomoSK_comp4093_c0_seq1
283bp
 putative_Switch-associated_protein_70_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0016020 C membrane
GO:0016444 P somatic cell DNA recombination
GO:0030027 C lamellipodium
GO:0030835 P negative regulation of actin filament depolymerization
GO:0032233 P positive regulation of actin filament bundle assembly
GO:0032880 P regulation of protein localization
GO:0033633 P negative regulation of cell-cell adhesion mediated by integrin
GO:0042995 C cell projection
GO:0045190 P isotype switching
GO:0051017 P actin filament bundle assembly
GO:0060754 P positive regulation of mast cell chemotaxis
GO:1902309 P negative regulation of peptidyl-serine dephosphorylation
3600 O_BomoSK13240_complete:A_BomoSK_comp13234_c0_seq1
1032bp
 hypothetical_protein_RR46_04071_[Papilio_xuthus]
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